Pairwise Alignments

Query, 401 a.a., Twitching motility protein PilT from Pseudomonas sp. S08-1

Subject, 382 a.a., Twitching motility protein PilT from Variovorax sp. SCN45

 Score =  330 bits (847), Expect = 3e-95
 Identities = 166/360 (46%), Positives = 246/360 (68%), Gaps = 4/360 (1%)

Query: 3   LTQMLKILSSQDGSDLYLSTGAPPCAKFNGVLKPLSQEPLKPGDVAAIAAGVMDELQRAD 62
           + ++L++++ +  SD+YLS  +P   + NG   P++ + L P    A+ A V    +  +
Sbjct: 4   MERILRLMAERRASDIYLSAHSPVLIRINGNCVPVNAQVLPPSAPLALLAEVAPAERIQE 63

Query: 63  FEKELEMNLAISVPNVGRFRINIFKQRNEVSIVARNIKMEIPKFEDLKLPEVLLKTVMEK 122
            E   E+N+A+++   G +RI+  +QR   ++V R I   IP+F DL LP++L   +ME+
Sbjct: 64  LESTGELNMALALEGTGNYRISAMRQRGSYAVVVRYISHTIPRFADLNLPDILKTLIMER 123

Query: 123 RGLVLFVGGTGSGKSTSLAALIDYRNRNSGGHIITIEDPVEYVHRHKKSIINQREVGVDT 182
           RGL+L VG TG+GK+T+LA+++DYRN N+ GHIIT+E+P+E+ + +KKS++NQR+VG DT
Sbjct: 124 RGLILMVGATGAGKTTTLASMLDYRNENASGHIITVEEPIEFTYTNKKSVVNQRDVGSDT 183

Query: 183 RSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRIIN 242
            S   ALKN LRQAPDVI IGEIRDR+TM  A+A+A +GHL ++TLHANN+ +AL+RI+ 
Sbjct: 184 ASLQTALKNALRQAPDVIQIGEIRDRDTMTAAIAYAQSGHLCVATLHANNSYRALNRILG 243

Query: 243 FFPEERRPQLLNDLGNNLKAFVSQRLVKTVDGKRRAAVEVLLGTPTIRDQIKRGDFSEIK 302
           F+P E R  LL DLG  L+A VSQRL++T  G R  AVEV+L T  + + I++GDFS +K
Sbjct: 244 FYPVEVRATLLGDLGGALRAVVSQRLLRTQAGSRVPAVEVMLNTALVAELIEKGDFSGVK 303

Query: 303 ETMEKSKNLGMQTFDQALIDLVHDGSIDEEEAVKNADSANNVRLKLKLYKDNPAAPQAAA 362
           E MEKS   G QTF++ +  L+ +  +  EE +  ADS  N+  +L+    N AAP+AAA
Sbjct: 304 EAMEKSMAEGSQTFEEDIARLITEERVTREEGLAQADSPTNLLWRLQ----NRAAPKAAA 359