Pairwise Alignments

Query, 401 a.a., Twitching motility protein PilT from Pseudomonas sp. S08-1

Subject, 378 a.a., Twitching motility protein PilT from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  387 bits (993), Expect = e-112
 Identities = 195/361 (54%), Positives = 260/361 (72%), Gaps = 1/361 (0%)

Query: 3   LTQMLKILSSQDGSDLYLSTGAPPCAKFNGVLKPLSQEPLKPGDVAAIAAGVMDELQRAD 62
           +  +L+++ S+ GSDL+L+   PP  K +G +  +S +PL      A+A  +M++ Q A+
Sbjct: 10  INDLLRLMLSRSGSDLFLTADFPPAIKVDGSIVKVSPQPLNATHTLALARAIMNDKQAAE 69

Query: 63  FEKELEMNLAISVPNVGRFRINIFKQRNEVSIVARNIKMEIPKFEDLKLPEVLLKTVMEK 122
           FE+  E N AIS P +GRFR+N F Q+ +V +V R I   +P  + L LP+VL    + K
Sbjct: 70  FERSKECNFAISPPAIGRFRVNAFIQQGKVGMVLRTIPAVLPTIDKLGLPQVLKDVALSK 129

Query: 123 RGLVLFVGGTGSGKSTSLAALIDYRNRNSGGHIITIEDPVEYVHRHKKSIINQREVGVDT 182
           RGL + VG TGSGKSTSLA+++D+RN N+ GHIIT+EDP+E+VH HK  ++ QREVG+DT
Sbjct: 130 RGLCILVGATGSGKSTSLASMVDWRNENTHGHIITVEDPIEFVHPHKNCVVTQREVGLDT 189

Query: 183 RSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRIIN 242
            S+ AALKNTLRQAPDVIL+GEIRDRE MEHA+ F++TGHL ++TLHAN+ANQALDRIIN
Sbjct: 190 DSWEAALKNTLRQAPDVILMGEIRDREAMEHAIQFSETGHLCLATLHANSANQALDRIIN 249

Query: 243 FFPEERRPQLLNDLGNNLKAFVSQRLVKTVDGK-RRAAVEVLLGTPTIRDQIKRGDFSEI 301
           FFPEERR QLL DL  NL+A +SQRLV   D K R AAVE++L +P I D I +GD +EI
Sbjct: 250 FFPEERRAQLLMDLSLNLRALISQRLVPRQDNKGRHAAVEIMLNSPLISDLIFKGDVAEI 309

Query: 302 KETMEKSKNLGMQTFDQALIDLVHDGSIDEEEAVKNADSANNVRLKLKLYKDNPAAPQAA 361
           KE M+KS  +GMQTFDQAL +      I  E+A++NADS N++RL++KL      +   A
Sbjct: 310 KEIMKKSTQMGMQTFDQALFNAFEANLITLEDALRNADSLNDLRLQIKLNSQRAKSLDLA 369

Query: 362 A 362
           A
Sbjct: 370 A 370