Pairwise Alignments

Query, 401 a.a., Twitching motility protein PilT from Pseudomonas sp. S08-1

Subject, 337 a.a., type IV pilus twitching motility protein PilT from Dickeya dadantii 3937

 Score =  221 bits (564), Expect = 2e-62
 Identities = 120/333 (36%), Positives = 193/333 (57%), Gaps = 1/333 (0%)

Query: 1   MDLTQMLKILSSQDGSDLYLSTGAPPCAKFNGVL-KPLSQEPLKPGDVAAIAAGVMDELQ 59
           MD+++ ++    Q+ SDL+L +G PP  + +G L    +Q PL   ++       ++   
Sbjct: 1   MDVSEWVRSSVKQNVSDLHLCSGHPPIWRIDGQLVADAAQPPLHNAELEQWCHSWLEPAC 60

Query: 60  RADFEKELEMNLAISVPNVGRFRINIFKQRNEVSIVARNIKMEIPKFEDLKLPEVLLKTV 119
                +  + + A+++P   R R N+F QR+ +S   R I    P  + L  P V+ +  
Sbjct: 61  EQQLRQSGQTDCALTLPEGQRLRANLFMQRHGLSAALRLIPSHQPDLQTLGAPPVVAELA 120

Query: 120 MEKRGLVLFVGGTGSGKSTSLAALIDYRNRNSGGHIITIEDPVEYVHRHKKSIINQREVG 179
               GL+L  G TGSGKST+LAA+I   N+ S  HIIT+EDP+E++H  ++S+I QRE+G
Sbjct: 121 ERADGLILVTGATGSGKSTTLAAMIAALNQRSARHIITLEDPIEFLHTSQRSLIQQREIG 180

Query: 180 VDTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDR 239
             +  F +AL+  LR+ PDV+L+GE+RD ET+  AL  A+TGHL ++TLH   A QA+DR
Sbjct: 181 RHSEGFASALRAALREDPDVLLLGELRDSETIRLALTAAETGHLVLATLHTRQAVQAVDR 240

Query: 240 IINFFPEERRPQLLNDLGNNLKAFVSQRLVKTVDGKRRAAVEVLLGTPTIRDQIKRGDFS 299
           +++ FP E +  +   L  +L+A V+Q+L+    G R A  EVLL TP + + I+ G   
Sbjct: 241 LVDVFPAEEKAFVRAQLAASLQAVVAQKLLPGAQGGRVALFEVLLATPAVSNLIREGKTH 300

Query: 300 EIKETMEKSKNLGMQTFDQALIDLVHDGSIDEE 332
           ++   ++    +GMQTF+Q+      +G +  E
Sbjct: 301 QVPSLLQTGSQVGMQTFEQSYQQRCREGVLRPE 333