Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional regulator HdfR from Pseudomonas sp. RS175

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 82/298 (27%), Positives = 135/298 (45%), Gaps = 21/298 (7%)

Query: 1   MDIKQLKFLIALDETRHFGQAAARCHITQPTLSMRLRSLEEELGLPLVNRGQRFEGFTAP 60
           +D+++L++ + + E  HFG+AA R H+ QP L+ ++ +LE ELG  L +R  R    TA 
Sbjct: 2   LDLRKLRYFLTVAEELHFGRAAIRLHLAQPPLTRQISALETELGFKLFDRTSRTVSLTAQ 61

Query: 61  GERVLAWARTVLAAYDGLQAEAAACRGNLVGTLRLGIV---PLSDFDPLSMMQRLHTEHP 117
           G   L +AR VL   +  Q  A        G L LG V    LSD      +Q      P
Sbjct: 62  GRSFLPYARGVLEQVELAQVIAGKLAAGTAGQLALGYVSSIALSDLFS-QAIQAFAQRFP 120

Query: 118 NLRFELSSLSSEQIIEQLANNRIDLGISYLERLDNERFESLSFTPTRMGLLYDQRFFYFG 177
           +++  L   +S  +  Q+A+ R+DLG+S L   D E  ++LS    R+            
Sbjct: 121 DVQLTLVECASGSLGAQVADGRLDLGLSRLLPQD-EAVQALSLGEERLVAAVS------S 173

Query: 178 EQPLSWQALIEL------PLGMLTS--GMHFRQSIDHSFHSRGLTPKPLLQTDAVYQLLQ 229
           E PL+ Q  + L      PL +  +  G    QSI+  +   G   +       +  ++ 
Sbjct: 174 ESPLARQPSVNLAQLSAYPLILFPADYGSGLNQSIEQLYRHHGQPLRLGPTGRQITSIIA 233

Query: 230 AVHGGLCCAVMPLNSGMDILTEDLRMQPIEEAQTLVPLGLIMRRGAPRSALAEACFAL 287
            V  G   A++P      ++ + +  +P+ E      L L++ R A +S L +A  A+
Sbjct: 234 LVAAGQGVALVP-ECTQSLMNKGVTYRPLVEVDACAQL-LVLTRTATKSVLVDAFLAV 289