Pairwise Alignments

Query, 359 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas sp. RS175

Subject, 370 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score =  352 bits (903), Expect = e-102
 Identities = 175/364 (48%), Positives = 248/364 (68%), Gaps = 10/364 (2%)

Query: 5   SQAYAGQLQDKVARLRDLLAPFDAPQPEVFDSPLQHFRLRAEFRLWREAGERHYAMFSQD 64
           ++ Y  QL +KV RL+ ++ PF+AP PEVF SP+ H+R+RAEFR+W +  + ++ +F Q 
Sbjct: 8   TEQYDAQLAEKVVRLQSMMTPFNAPVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQ 67

Query: 65  DKRTPILIEQFPIASLRINQLMPQLKAAWQASAPLSHKLFQVEFLTTLAGDAMITLCYHR 124
            K + I ++ FP AS  INQLM  +    + +  L +KLFQ+++LTT +  A+I+L YH+
Sbjct: 68  TK-SRIRVDSFPAASELINQLMTLIMDGVRNNPLLRNKLFQIDYLTTQSNQAIISLLYHK 126

Query: 125 PLDEHWHAAASKL---------ASDLSVSIIGRSKGKREVIGHDYVVEKLDVAGRTFSYR 175
            L++ W   A  L         A +++V +IGR+   + ++  DY+ E+L VAG+   YR
Sbjct: 127 ALNDEWREQAEALRDALRDALRAQNINVHLIGRATKTKIMLDQDYIDERLPVAGKEMVYR 186

Query: 176 QPEGAFTQPNGTVNQKMLNWAYDALGDRTDDLLELYCGNGNFTLPLATRVRKVLATEISK 235
           Q E +FTQPN  +N +ML WA  A    T DLLELYCGNGNF+L LA    +VLATEI+K
Sbjct: 187 QVENSFTQPNAAMNVQMLEWALKATEGSTGDLLELYCGNGNFSLALARNFDRVLATEIAK 246

Query: 236 TSVNAALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPR 295
            SV AA  N++ N +DNV ++R++AEE T+A+N VR F RL+GIDLKSY+  ++FVDPPR
Sbjct: 247 PSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRQFNRLEGIDLKSYQCETIFVDPPR 306

Query: 296 AGMDPDTCELTRRFENILYISCNPVTLAANIAQLHDTHRIVRCALFDQFPWTHHMESGVL 355
           +G+D +T ++ + +  ILYISCNP TL  N+  L  TH++ R ALFDQFP+THHME GVL
Sbjct: 307 SGLDSETEKMVQAYPRILYISCNPETLCKNLETLGQTHKVERLALFDQFPYTHHMECGVL 366

Query: 356 LTRR 359
           LT R
Sbjct: 367 LTAR 370