Pairwise Alignments

Query, 359 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas sp. RS175

Subject, 432 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Enterobacter asburiae PDN3

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 30/292 (10%)

Query: 72  IEQFPIASLRINQLMPQLKAAWQASAPLSHKLFQVEFLTTLAGDAMITLCYHRPLDEHWH 131
           ++Q PI +  +  L+P+++        + H L  VE +    G  M+ L +  PL +   
Sbjct: 159 VQQCPILAPHLEALLPEVRTCLSGLDGVRH-LGHVELVMANNGPLMV-LRHTAPLSKKDR 216

Query: 132 AAASKLAS--DLSVSIIGRSKGKREVIGHD--YVVEKLDVAGRTFSYRQPEGAFTQPNGT 187
               + +   DL++ +  +S+   +V G    Y    L +   TFS R     F Q N  
Sbjct: 217 EKLERFSHSHDLALFLAPQSEILEQVTGEAPWYASNGLRL---TFSPRD----FIQVNDG 269

Query: 188 VNQKMLNWAYDALG-DRTDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNAALSNLS 246
           VNQ M+  A   L   ++D +L+L+CG GNFTLPLA     V+  E  +  V     N  
Sbjct: 270 VNQLMVEKALTWLDVQKSDRVLDLFCGMGNFTLPLAREAASVVGVEGVEALVAKGQENAQ 329

Query: 247 ENAVDNVTLVRLSAEE-LTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAGMDPDTCEL 305
           +N + NVT    + EE +T+     +P+ + QG D        + +DP RAG       +
Sbjct: 330 QNGLQNVTFFHQNLEEDVTQ-----QPWAK-QGFD-------KILLDPARAGAPGVMAHI 376

Query: 306 TRRF-ENILYISCNPVTLAANI-AQLHDTHRIVRCALFDQFPWTHHMESGVL 355
            +   + ++Y+SCNP TLA +  A +   ++I R A+ D FP T H+ES VL
Sbjct: 377 IKLAPKRVVYVSCNPATLARDSEALISAGYQIQRLAMLDMFPHTGHLESMVL 428