Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Pseudomonas sp. RS175

Subject, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 3e-24
 Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 12  GQFESHSNELLRFLTRQVKCEELAADLRQETWLRFRRRESGTEIGNLRAFLYRIARNLII 71
           G F  H++ L  +L R+V+  +LAADL QE++LR   + +G  I N + +LYR A NL+I
Sbjct: 8   GLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNLLI 67

Query: 72  DYRRQQ---KSRPVEEQISIELVSAQPGPERAASDAQRLERLQRVVEGLPPHLRQALLWN 128
           D+ RQ+   K+  V  +   E+     G E  A   Q+ + L++ +  LP   +Q    N
Sbjct: 68  DHIRQEARRKTDAVPHEALAEIEDEVAGLEAQAMAQQQRQALKQALAELPERTQQIFRLN 127

Query: 129 RLDGLTQREIGERLGVSESMAGRYILKALEHCQQQM 164
           R++G+T  ++   L +S+S   +++ KAL +  Q++
Sbjct: 128 RIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRL 163