Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Pseudomonas sp. RS175

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 3e-22
 Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 2/152 (1%)

Query: 15  ESHSNELLRFLTRQVKCEELAADLRQETWLRFRRRESGTEIGNLRAFLYRIARNLIIDYR 74
           E +  EL+ FL+ ++   + A D+  + +LR   R    +I + RAFLYR A NL++D  
Sbjct: 2   EHYYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRH 61

Query: 75  RQQKSRPVEEQISIELVSAQPGPE--RAASDAQRLERLQRVVEGLPPHLRQALLWNRLDG 132
           R+Q  R  E   +++  S     E        QRL  +Q+ ++ L    R + L  +++G
Sbjct: 62  RRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEG 121

Query: 133 LTQREIGERLGVSESMAGRYILKALEHCQQQM 164
           L+ ++I ERLG+S S+  ++I+ A++HC+ +M
Sbjct: 122 LSHQQIAERLGISRSLVEKHIVNAMKHCRVRM 153