Pairwise Alignments

Query, 294 a.a., Protein RarD from Pseudomonas sp. RS175

Subject, 304 a.a., putative chloramphenical resistance permease RarD from Alteromonas macleodii MIT1002

 Score =  141 bits (355), Expect = 2e-38
 Identities = 84/291 (28%), Positives = 154/291 (52%), Gaps = 6/291 (2%)

Query: 4   GIALSVSASALFAVMYYYTSLLSPLTGLEIFGWRMLLTMPCMTVFMLVAREWHLVTALIR 63
           G+  +++A +++ V   Y   L  L   EI   R++ ++  +   +   ++W  V A +R
Sbjct: 11  GVICAIAAYSMWGVAPVYFKQLMVLPAAEILMHRVIWSVVLLVGLIAALKQWPKVGAALR 70

Query: 64  RLVATPRLLIAAIASSALMGAQLWLFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGER 123
                  L +A +    L+GA   LF+WA  N + LD SLGY++ PL  V  GR+  GER
Sbjct: 71  NKRVMQILFVAGL----LLGANWLLFIWAINNDHILDASLGYYINPLINVFLGRLFLGER 126

Query: 124 LSYLQKVAVFFATLGVFNELYQVGGFSWATLLVVLGYPLYFILRKRTKTHNLGGLWLDMT 183
           L  LQ+VAV  A +GV   ++  G   W  L++   + +Y +LRK+    +L GL+++  
Sbjct: 127 LRNLQRVAVGLAVIGVAILIFSYGHVPWIALVLAGSFSVYGLLRKQVAVDSLPGLFIETL 186

Query: 184 LILPLA-LWFVQSGEQGFEVFNQYPWLSLLIPLLGVISVSALVCYIVASRLLPFSLFGLL 242
           ++ P A +++V  G +   +FN    L+ LI   G+++ + L+C+  A+R + +S  G  
Sbjct: 187 MLSPFAIIYWVFFGSEYSNLFNNDATLNTLILAAGIVTTAPLLCFTAAARRIMYSTLGFF 246

Query: 243 SYVEPVLLLGVAL-LLGESIKATEWLTYIPIWMAVAVLVFEGFKHLMRQRR 292
            Y+ P L+  +A+ L GE ++ +  +T+  +W A+ +   +   +   QR+
Sbjct: 247 QYIGPTLMFILAVYLYGEPLEESRLVTFGFVWFALILFSADSLVNYRSQRK 297