Pairwise Alignments

Query, 272 a.a., Inner membrane ABC transporter permease protein YdcV from Pseudomonas sp. RS175

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  266 bits (679), Expect = 5e-76
 Identities = 130/252 (51%), Positives = 179/252 (71%)

Query: 14  LRLFGLLMIVFMIAPLLAVVPISFSSGTFLSYPLPGLSLRWYEKVFSAGPWLQSLRNSLL 73
           LR+   L+++F+I P+L ++P+SF+SG+FL YPL G SL WY+  F++  W+++L+NS++
Sbjct: 17  LRILCGLILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKNSVI 76

Query: 74  VGCASTALATLLGTLAALAFARRNLPGATHVLALLISPMIIPPVISGLGMYFLFGQLGLT 133
           V  A+T LA + GTLAA+   R N PG   V+AL+ISPM++P VI G+  Y  F  LGL 
Sbjct: 77  VAPAATVLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGLG 136

Query: 134 GTLTGMILAHTVLATPFVLINVAASLQGLDMSLLRAAAMAGASPVRAFIDVALPIIAPGV 193
            +   +I+ H VL  PFV+I V+A+LQG + +L+RAAA  GASP+ AF  V LP+IAPGV
Sbjct: 137 NSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGV 196

Query: 194 ISGALFAFMTSFDEIVVVLFIGGPGQRTLPRQMFDGIRDTIDPSIVAMSSFLLVVGLLGL 253
           ISGALFAF TSFDE+VV LF+ GP Q TLPRQMF GIR+ + P+I A ++ L+   +L L
Sbjct: 197 ISGALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLL 256

Query: 254 LATTWLSLRSNR 265
           L   WL  RS +
Sbjct: 257 LTLEWLRGRSEK 268