Pairwise Alignments

Query, 272 a.a., Inner membrane ABC transporter permease protein YdcV from Pseudomonas sp. RS175

Subject, 272 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  253 bits (645), Expect = 4e-72
 Identities = 126/249 (50%), Positives = 170/249 (68%)

Query: 17  FGLLMIVFMIAPLLAVVPISFSSGTFLSYPLPGLSLRWYEKVFSAGPWLQSLRNSLLVGC 76
           +G  M++F+I P+L +VP+SF+ G+FLSYPL G SLRWY + F +  WL +L NSLL+  
Sbjct: 19  YGAAMLLFLIVPVLVIVPLSFNGGSFLSYPLAGFSLRWYREFFHSSEWLSALGNSLLIAP 78

Query: 77  ASTALATLLGTLAALAFARRNLPGATHVLALLISPMIIPPVISGLGMYFLFGQLGLTGTL 136
            +T LAT+LG LA++   R    G + V+A+LISPMI P VI  +GM+F F +L L  + 
Sbjct: 79  LATVLATVLGVLASVGLVRGEFRGKSLVMAVLISPMIAPVVIVAVGMFFFFAKLSLLNSY 138

Query: 137 TGMILAHTVLATPFVLINVAASLQGLDMSLLRAAAMAGASPVRAFIDVALPIIAPGVISG 196
            G++LAH VL  PFV+I V A L+  D +L RAAA  GA P+ AF  V LP+IAPGV SG
Sbjct: 139 IGLVLAHAVLGVPFVVITVTAVLKNYDQNLTRAAASLGAPPLLAFRKVTLPLIAPGVFSG 198

Query: 197 ALFAFMTSFDEIVVVLFIGGPGQRTLPRQMFDGIRDTIDPSIVAMSSFLLVVGLLGLLAT 256
           ALFAF TSFDE++V LF+  P QRTLP QMF GIR+ +DP+I A ++ ++   L+ L+  
Sbjct: 199 ALFAFATSFDEVIVTLFLASPRQRTLPLQMFAGIRENLDPTIAAAATMMVAAALVLLVVM 258

Query: 257 TWLSLRSNR 265
             L  RS +
Sbjct: 259 EILRRRSEK 267