Pairwise Alignments

Query, 345 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 4/328 (1%)

Query: 13  RFIPGHYQPAALIDLALSRDIDSHRLLRGTGLFHDDILAGRSRISPQQFLGLIENSRRLL 72
           R I  HY  AAL   A     D   LL+  G+  + +   R+RI+P+QF  L++     L
Sbjct: 4   RTIASHYARAALGG-ARRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLWLAL 62

Query: 73  DASDSSFLFGQRLLPGHYGPASHALRHAPNLHQALQTLIEQQALLSPLAAPRLLLDEHYA 132
           D     F  G     G +    HAL H   L +AL+  +   +L       +L  +   A
Sbjct: 63  DDEYLGFADGPSKR-GTFAMMCHALIHCRTLEKALERGLLFYSLFPQGPRWQLTREGEMA 121

Query: 133 YVHWLDSCGAHDQWRFVLEASMTSMIAMSTWLSGERLPW-QCSFRHSEPRYVEQYWVHLG 191
            +  LD     D   F+ E  +     + +WL G+R+   Q +F + +P +  +Y +   
Sbjct: 122 RLS-LDDSQLWDPEHFLSECLLVIWHRLGSWLIGQRIRLHQATFSYPQPAHASEYDLLFP 180

Query: 192 EQTQFDRPLDLMRLPRHCLAQPWPDASATAGQVARIEAREQLDHLGFTASFLDCVYEYLR 251
               F  P   +  P   L  P      T          + L       S    +   L 
Sbjct: 181 CAQVFGAPNSSLVFPARYLNLPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRRLLS 240

Query: 252 AHVRQTPSLEQTAQAFAMSPATLKRKLHKHHTGFQQQVDRVHTHVALYLYQVKGFSNEEV 311
                 P LE  AQ   +SP TL+R L +  T FQ   D +   +A+Y       S +E+
Sbjct: 241 RDRSPWPDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYHLGRADLSLQEI 300

Query: 312 AQYLSFNDTANFRRSFKRWTGSTPNLIR 339
           A+ L F++ + F R+FK+WTG TP   R
Sbjct: 301 AEQLGFSEPSAFHRAFKKWTGLTPGAYR 328