Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 604 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  435 bits (1118), Expect = e-126
 Identities = 240/608 (39%), Positives = 345/608 (56%), Gaps = 27/608 (4%)

Query: 1   MIRPLLLFLISLALSSPAGAAISESHGYAQFGTLKYPARFTHFDWVNPQAPKGGTLRVMA 60
           MI  +LL  I+L        AI ES+ +A  G  +Y   F HFD+VNP APKGG + + A
Sbjct: 1   MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA 60

Query: 61  FGTFDTLNPYTFKGSSPVSTPNFLQYGINELNEPLMVGTGQYAPSGDEPTSSYGLIAQSV 120
            GTFD  N Y  +G+    T         +L + L      +  S DEP S Y LIA+S 
Sbjct: 61  LGTFDNFNRYALRGNPGART--------EQLYDTL------FTTSDDEPGSYYPLIAESA 106

Query: 121 EYSDDRSWVVFNLRPEARFHDGVPITAYDVAFSYRTLLKEGHPLYRTNLQEVLRVDILNP 180
            Y+DD SWV   + P ARFHDG PITA DV F+++  + EG P +R  + +   V  + P
Sbjct: 107 RYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRL-VYKGTTVKAIAP 165

Query: 181 LKIRFVFKRAGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITQVQPGRQL 240
           L +R    + G   + L L  LPV P+ YWKD         PPL SGPYR+T  + G+ +
Sbjct: 166 LTVRIELAKPGKEDM-LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNI 224

Query: 241 VFERVKDYWGKDLPVNRGKYNYDRMEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGY 300
           V+ RVKDYW  +LPVNRG++N+D +  ++Y D +VAFEAFKAG FD+ +E+ AKNWA  Y
Sbjct: 225 VYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRY 284

Query: 301 DFPAVKRGDVIKAQIPHRIPTQTQGLFMNTRRGTFADARVREALGLMFDFEWTNRTLFSG 360
                 +  +IK +  +     T+ L  N +R  F+D RVREA+ L FDFEW N+ LF  
Sbjct: 285 TGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYN 344

Query: 361 AYKRTLSYYPNSEFSASGLPVGHEWLLLKPYREQLPPRLFTEPFSLPQTDGRGIPRDTLR 420
           A+ RT SY+ N+E++A   P   E +LL P ++ LP  +FT+ +  P + G G  RD L 
Sbjct: 345 AWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLL 404

Query: 421 RALALLKEAGWTLNGQRLLNADS-QPLRFEILLVNPNLERILQPYVGNLASIGIQARLRT 479
           +A  LL EAGW L GQ+ +NA + QPL FE+LL   +  + + P+  +L  +GI   +R 
Sbjct: 405 KADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRK 464

Query: 480 VDRAQYKQRLDQFDFDMILLTLGQTLSPGLE---QWQYFHSSQASVKGSKNYAGIANPVV 536
           VD +Q   R+   D+DM+         P  +    W     S   +  + N  G+ +PV+
Sbjct: 465 VDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISW-----SSEYINSTYNAPGVQSPVI 519

Query: 537 DHLLEKLLAAR-TRDEQVAAGKALDRVLLWQHYCIPNWYLNYHRLAYHDRFAF-VTTPPY 594
           D L+ +++AA+  +++ +  G+ALDRVL W +Y +P WY+   RLA+ D+F+     P Y
Sbjct: 520 DSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIY 579

Query: 595 TLGLSAWW 602
           +LG+  WW
Sbjct: 580 SLGIDTWW 587