Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 521 a.a., PAS from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  496 bits (1278), Expect = e-145
 Identities = 269/522 (51%), Positives = 356/522 (68%), Gaps = 2/522 (0%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MR N P+TQ ERTFPA +RLISTT+    ITYCNDAFV +SGF++EEL+G PHNLVRHPD
Sbjct: 1   MRVNMPITQTERTFPASERLISTTDLNSHITYCNDAFVTLSGFTREELVGQPHNLVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P++VFAHMW T+KQG PWMG+VKNR K GD+YWV+AYVT ++E  +++GYESVR  PT 
Sbjct: 61  MPASVFAHMWETIKQGKPWMGVVKNRSKQGDYYWVSAYVTAVYENGRIVGYESVRSLPTR 120

Query: 121 EQVSRAEALYRRINQGKPAVPRSDKWLPILQDWLPFILVSQLSFIVGAF-LNSSWGFALA 179
           +QV RAEALY R+  GK AV  S      L   LP IL + L+  VG + L+      + 
Sbjct: 121 DQVRRAEALYARLRAGKAAVSASSSAAYHLIRQLPMILCA-LALAVGVYLLDDLPSIIMI 179

Query: 180 ALLSVPLGLMGLQWQQRGIKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMSILSQEARL 239
            ++ V LG+     Q+  I++ L    +  +  LIA  Y+DSRG QA+L++++LS+EARL
Sbjct: 180 PIVMVVLGVFLEVRQRSSIRKTLEEHPKAFTSALIALTYSDSRGPQAQLDLAMLSEEARL 239

Query: 240 KTCLTRLQDTAEHLNDQARQSNALAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHV 299
           +T LTRL DT E +   A +S  L+   +  L++QR E +Q ATA+NQMAAT QEV  +V
Sbjct: 240 QTALTRLADTGESVRQHAGRSAQLSLRQAESLDQQRSEADQSATAINQMAATIQEVTHNV 299

Query: 300 QRTADATQEANRLTGRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVVDVIK 359
           Q TA A +EA++L  +GR +A E+  AI  ++  V + G  V +LA  +  IG VVDVI 
Sbjct: 300 QNTAHAAEEADKLAQQGRGLADESLLAIRHMATSVTDIGNAVGELADATQSIGSVVDVIT 359

Query: 360 GIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQTAN 419
            IA QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  ST QI  +I  L+  A+
Sbjct: 360 SIAQQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSTEQIQQIITSLRDGAD 419

Query: 420 NAVQTMDAGHRQAEEGVARVMEADQALVGISEAVANITDMTTQIAAATEEQSSVAEEISR 479
            AV+T   G + ++E VA V    +AL GIS++V  IT M+ Q+A+A+EEQS VAE IS+
Sbjct: 420 RAVKTASKGEQISQESVASVEAVQKALDGISQSVTRITGMSQQMASASEEQSHVAETISQ 479

Query: 480 NISNISELADQTSDQAHNSALLSEELTRTANTQYSLVERFNR 521
            I+ I++L D+++ QA   + +S EL   A   +SL ERF+R
Sbjct: 480 QITRIAQLCDESASQAQQGSQISSELEEMAQYLHSLAERFSR 521