Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC99

 Score =  246 bits (629), Expect = 1e-69
 Identities = 168/525 (32%), Positives = 268/525 (51%), Gaps = 41/525 (7%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           M ++  VTQ+         L+STT+ +  IT+ ND FV++SGF+ +EL G PHN+VRHPD
Sbjct: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P A FA MW TLK+G PW GIVKNR K+GDHYWV A   P+    ++ GY S+R + T 
Sbjct: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120

Query: 121 EQVSRAEALYRRINQGKPAVPRSDKWLPILQDW------------------LPFILVSQL 162
           E+++  E LY+ +N G+    R  K L + + W                  L FIL++ +
Sbjct: 121 EEIAAVEPLYKALNAGRTG-KRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAM 179

Query: 163 SFIVGAFLNSSWGFALAALLSVPLGLMGLQWQ-QRGIKRLLRLAEQTTSDPLIAQMYTDS 221
            + V A + +   + L AL+ V L     +WQ  R I+ + R A +  +    +  +  +
Sbjct: 180 LWFVAAPVVT---YILCALV-VLLASACFEWQIVRPIENVARQALKVATGERNSVEHL-N 234

Query: 222 RGVQARLEMSILSQEARLKTCLTRLQDTAEHLNDQARQSNALAHNSSSGLERQRVETEQV 281
           R  +  L +  + Q   +  C   + D +  ++     S  LA     G +     T+Q 
Sbjct: 235 RSDELGLTLRAVGQLGLM--CRWLINDVSSQVSSVRNGSETLA----KGTDELNEHTQQT 288

Query: 282 ATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIERLSVVVGETGQTV 341
              V Q  AT  ++A+ V++ +     A++L+    + A +  EA   ++ V+    +T+
Sbjct: 289 VDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEA---MTTVI----KTM 341

Query: 342 TQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTS 401
             +A  +  IG +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA R++
Sbjct: 342 DDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSA 401

Query: 402 ESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGISEAVANITDMTT 461
            +   I  LI        +  Q + A  R  E+ VA+V    Q +  IS +     D  +
Sbjct: 402 NAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLS 461

Query: 462 QIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEELT 506
            +  A +E + + +   +N   + E A  ++   H ++ L + +T
Sbjct: 462 SLTRAVDELNLITQ---KNAELVEESAQVSAMVKHRASRLEDAVT 503



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 34/185 (18%), Positives = 77/185 (41%), Gaps = 2/185 (1%)

Query: 326 AIERLSVVVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRG 385
           A + L V  GE   +V  L + SDE+G  +  +  +      L  + + + +        
Sbjct: 216 ARQALKVATGERN-SVEHLNR-SDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSET 273

Query: 386 FAVVADEVRQLAQRTSESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQA 445
            A   DE+ +  Q+T ++  Q  A + ++  +      T  A  + +       ++  +A
Sbjct: 274 LAKGTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEA 333

Query: 446 LVGISEAVANITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEEL 505
           +  + + + +I D T +I   T   + +A + +    N +  A +  +Q    A+++ E+
Sbjct: 334 MTTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEV 393

Query: 506 TRTAN 510
              A+
Sbjct: 394 RHLAS 398