Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 514 a.a., PAS domain-containing protein from Dickeya dadantii 3937

 Score =  246 bits (628), Expect = 1e-69
 Identities = 177/522 (33%), Positives = 262/522 (50%), Gaps = 44/522 (8%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MRNNQPVTQRE  F     L+S T+    I Y NDAF+++SGF  +E+ G PHN VRHPD
Sbjct: 1   MRNNQPVTQREYVFDRDATLMSVTDVNSHIVYANDAFIQVSGFEPDEIDGQPHNFVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P   F  MW TLK   PW  +VKNR K+GDHYWV A   PI    +  GY SVR +P+ 
Sbjct: 61  MPVEAFRDMWQTLKHQEPWTALVKNRRKNGDHYWVRANAVPIVRQGRTTGYMSVRTQPSR 120

Query: 121 EQVSRAEALYR---------RINQG----KPAVPRSDKWLPILQDW------LPFILVSQ 161
           ++V  AE LY+         ++++G            +   I   W      +   L+S 
Sbjct: 121 QEVDAAEKLYQTMRSEGNNLKLHRGVLFRAGLTGLFSRLKLISMRWRLRGLIMLAALISY 180

Query: 162 LSF--IVGAFLNSSWGFALAALLSVPLGLMG-LQWQQRGIKRLLRLAEQTTSDPLIAQMY 218
           ++F  I G F +S +  + A +  + L L G L+WQ   IK +  + +Q  +   IA   
Sbjct: 181 VAFWTIHGDF-DSDFYISSAFMTGMMLLLDGLLEWQL--IKPIEMVKQQALN---IATGN 234

Query: 219 TDSRGVQARLEMSILSQEARLKTCLT---RLQDTAEHLNDQARQSNALAHNSSSGLERQR 275
            ++   + R +     Q A  +  L     + D +  + +    S+ LAH    G E   
Sbjct: 235 ANTIDYENRADEIGTIQRAIGQLGLMFRWLVDDISTQVLNIRSASDELAH----GSEDMS 290

Query: 276 VETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIERLSVVVG 335
              E+ A  V Q AA   E+ + VQ     T EA++      D A            V+G
Sbjct: 291 DHAERTAANVQQTAAAMNEINTTVQTNTTTTSEASQQAATACDAAISGGR-------VIG 343

Query: 336 ETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQ 395
           E  +T+  +   S++I G+  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR 
Sbjct: 344 EMEKTMDSIVASSEKIAGITSIIDNIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRN 403

Query: 396 LAQRTSESTGQIHALI-AKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGISEAVA 454
           LAQR++ +  +I  LI + ++Q    +    DAG    +  V RV    Q +  I+++  
Sbjct: 404 LAQRSASAANEIKQLIESSVEQVRYGSTHVRDAGD-STQNIVTRVNSVSQLISHIADSTK 462

Query: 455 NITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSDQAH 496
             T   ++I  A EE   + ++ +  ++  ++ +DQ   QAH
Sbjct: 463 EQTVGLSEIGRAVEELEQITQKNASQVNACAQASDQLKQQAH 504