Pairwise Alignments

Query, 688 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 549 a.a., flagellar hook-associated protein FlgK from Serratia liquefaciens MT49

 Score =  271 bits (693), Expect = 6e-77
 Identities = 159/445 (35%), Positives = 243/445 (54%), Gaps = 15/445 (3%)

Query: 2   SLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLAD 61
           SL+N  MSGL+A+Q AL T  NNI+N + AGY+RQ  +          + FIG+G T+  
Sbjct: 4   SLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVTVTS 63

Query: 62  VRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVNA 121
           V R YN ++  QL+   S      AY  +I+ +D+LL+     L+  +  FF++++N+ +
Sbjct: 64  VNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLVS 123

Query: 122 KPGDDASRQLLLSDAQALSNRFNSVASQLTAQSETINGNLSNMVEQINNLATTVAQLNKK 181
             GDDA+RQ +L  A  L N+FN+    L      +N  LS+   QIN+ +  +A+LN +
Sbjct: 124 NAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQQLSDSANQINSYSQQIAKLNDE 183

Query: 182 IAEVSNSGGAPNDLLDARSETIRQLSTFTGTQVV-ENGSSLDIYLGSGQPLVMGNITNKL 240
           I  +  SGG PN LLD R + + +L+   G QV+ ++G +  +   +G  LV G+   ++
Sbjct: 184 ITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVMQQDGDAYTVSFANGLTLVQGSNAYQV 243

Query: 241 EAVPDKNDPGRMGIQLNSGSSVMDLTQ-VLTGGEIGGLMRYRSTVLDPAMNELGRVALVV 299
           EAVP   DP R+ I  N G+ V ++ +  +T G + G++++RS  LD A N+LG++AL +
Sbjct: 244 EAVPSNGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRSESLDSARNQLGQLALAM 303

Query: 300 ADQMNTIQASGIDKNGAFGSNLFSNINSTAQMSQRSVAALSNSAGSGNFNVSIEDTGKLT 359
           AD  N    +G D NG  G++ FS            V   S +AG    +VS  DT K+ 
Sbjct: 304 ADSFNQQHRAGFDLNGDAGTDFFS-------FGGGRVVDNSRNAGDAALSVSYTDTSKVK 356

Query: 360 TNDYKVTFTSATGYIVQRLPDGTSM----GAFSTTTTPPPVIDGFSMTFANGTAAAGDSF 415
            NDY+V F   + + V RLPD   +    G  +TT  P    DG  +   +GTA   DSF
Sbjct: 357 ANDYRVEF-DGSNWQVSRLPDNVKVNATAGVDATTGKPTLSFDGLKVDI-DGTAQKNDSF 414

Query: 416 KITPTRNAAGSIKTEMTDSKRLAIA 440
            + P  + AGS+K  +TDS  +A A
Sbjct: 415 TVKPVSDVAGSLKVAITDSANIAAA 439



 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 27/224 (12%)

Query: 464 TMTTKLDIYDEATTTIIQNGIKSSMPVKVVFGVTSADGTSQAYQLLDAQGGTLS-SGTIK 522
           T T+K+   D        N   S +P  V    T+    +     L   G  +   GT +
Sbjct: 350 TDTSKVKANDYRVEFDGSNWQVSRLPDNVKVNATAGVDATTGKPTLSFDGLKVDIDGTAQ 409

Query: 523 PGQSNTLSLSVPLKDASGNPIMDSSVPPVQRTVTFDMSIAGAPSNGAGIDISLSQPGSLD 582
              S T+    P+ D +G+         V  T + +++ AG   +G G           D
Sbjct: 410 KNDSFTVK---PVSDVAGSL-------KVAITDSANIAAAGKDDSGRG-----------D 448

Query: 583 NRNGTALAGLQTAKTVDTGSASKGISLNDAYGKLVEGVGAKAAQGKLDSAATGAILNNAK 642
           N N   L  LQT K VD  +   G     AY  +V  VG + A  K+ + +   I+    
Sbjct: 449 NENAKKLLDLQTKKLVDGKATFSG-----AYASMVSSVGNQTASAKVSATSQANIVKQLT 503

Query: 643 NARDSLSGVDLDEETGNLVKFQQYYTASSQIIKAAQEIFSTLIN 686
             + S+SGV+LDEE G L++FQQYY A++Q+I+ A  +F  L+N
Sbjct: 504 IQQQSISGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLN 547