Pairwise Alignments

Query, 688 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 546 a.a., flagellar hook-associated protein FlgK from Enterobacter asburiae PDN3

 Score =  238 bits (608), Expect = 4e-67
 Identities = 152/445 (34%), Positives = 242/445 (54%), Gaps = 15/445 (3%)

Query: 2   SLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLAD 61
           SL+N  MSGLSA+Q+AL T  NNI++ + AGY+RQ TV     S   G  ++G+G  ++ 
Sbjct: 3   SLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGGWVGNGVYVSG 62

Query: 62  VRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVNA 121
           V+R Y++++  QL+   + +S       Q++ +D +LSD+   L+  L  FF S+Q + +
Sbjct: 63  VQREYDAFITNQLRAAQTQSSGLTTRYQQMSKIDDVLSDTTNSLSTTLQDFFKSLQTLVS 122

Query: 122 KPGDDASRQLLLSDAQALSNRFNSVASQLTAQSETINGNLSNMVEQINNLATTVAQLNKK 181
              D A+RQ +L  A  L N+F +    L  Q   +N  +S+ V QINN A  +A LN +
Sbjct: 123 NAEDPAARQTVLGKASGLVNQFKTNDQYLRDQDAQVNTAISSSVSQINNYAAQIANLNDQ 182

Query: 182 IAEVS--NSGGAPNDLLDARSETIRQLSTFTGTQV-VENGSSLDIYLGSGQPLVMGNITN 238
           I+ ++   +G +PNDLLD R + + +L+   G +V V++  + +I LG+G  LV G+  +
Sbjct: 183 ISRLTGVGAGASPNDLLDQRDQLVTELNKIVGVEVSVQDSGTFNISLGNGYSLVQGSKAS 242

Query: 239 KLEAVPDKNDPGRMGIQL--NSGSSVMDLTQVLTGGEIGGLMRYRSTVLDPAMNELGRVA 296
           +L AV    DP R  I    +   ++    +++T G +GGL+ +R+  LD A N L ++A
Sbjct: 243 QLAAVKSSADPARTTIAYVDDVAGNIEIPEKLITTGSLGGLLTFRAEDLDKARNSLNQMA 302

Query: 297 LVVADQMNTIQASGIDKNGAFGSNLFSNINSTAQMSQRSVAALSNSAGSGNFNVSIEDTG 356
           L  AD MNT   +G D NG  G  LF N  S A +S       S + GS     S+ D+ 
Sbjct: 303 LAFADAMNTQHEAGFDANGDAGGKLF-NFGSPAVLSN------SKNGGSAVVTASVTDSK 355

Query: 357 KLTTNDYKVTFTSATGYIVQRLPDGTSMGAFSTTTTPPPVIDGFSMTFANGTAAAGDSFK 416
           ++   DYK+ F + T + V R  D TS    S   +     DG ++   +GTA   DSF 
Sbjct: 356 QVQATDYKLQF-NGTDWTVTRTSDKTSF-TMSPDASGNLSFDGLNVN-VSGTANTKDSFT 412

Query: 417 ITPTRNAAGSIKTEMTDSKRLAIAA 441
           + P  N   ++   ++D  +LA+A+
Sbjct: 413 VKPVSNVIMNMDLAISDESKLAMAS 437



 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 9/172 (5%)

Query: 517 SSGTIKPGQSNTLSLSVPLKDASGNPIMDSS--VPPVQRTVTFDMSIAGAPSNGAGIDIS 574
           +S T+ P  S  LS      + SG      S  V PV   +  +M +A +  +   +  S
Sbjct: 380 TSFTMSPDASGNLSFDGLNVNVSGTANTKDSFTVKPVSNVI-MNMDLAISDESKLAM-AS 437

Query: 575 LSQPGSLDNRNGTALAGLQTAKTVDTGSASKGISLNDAYGKLVEGVGAKAAQGKLDSAAT 634
           +   G  DNRNG  L  LQ  K V         + NDAY  LV  VG+  A  K+ S   
Sbjct: 438 VQNGGESDNRNGQKLLDLQNGKVVGGNK-----TFNDAYASLVSTVGSSTASLKVSSQTK 492

Query: 635 GAILNNAKNARDSLSGVDLDEETGNLVKFQQYYTASSQIIKAAQEIFSTLIN 686
             +       + ++SGV+LDEE GNL ++QQYY A++Q+++ A  +F  +IN
Sbjct: 493 ANVETQLIKQQQTISGVNLDEEYGNLQRYQQYYLANAQVLQTASTLFDAIIN 544



 Score = 28.5 bits (62), Expect = 9e-04
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 8   MSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNV 51
           +S + +S  +L  +    ANV+T    +QQT+       +YGN+
Sbjct: 475 VSTVGSSTASLKVSSQTKANVETQLIKQQQTISGVNLDEEYGNL 518



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 518 SGTIKPGQSNTLSLSVPLKDASGNPIMDSSVPPVQRTVTFDMSIAGAPSNGAGIDISLSQ 577
           SGT      N  SL V    AS    + SS  P + T+ +   +AG       I   L  
Sbjct: 222 SGTFNISLGNGYSL-VQGSKASQLAAVKSSADPARTTIAYVDDVAG----NIEIPEKLIT 276

Query: 578 PGSLDNRNGTALAGLQTAKTVDTGSASKGIS-----LNDAYGKLVE-GVGAKA-AQGKLD 630
            GSL         GL T +  D   A   ++       DA     E G  A   A GKL 
Sbjct: 277 TGSL--------GGLLTFRAEDLDKARNSLNQMALAFADAMNTQHEAGFDANGDAGGKLF 328

Query: 631 SAATGAILNNAKN 643
           +  + A+L+N+KN
Sbjct: 329 NFGSPAVLSNSKN 341