Pairwise Alignments

Query, 172 a.a., ECF RNA polymerase sigma factor SigE from Pseudomonas sp. RS175

Subject, 183 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 59.3 bits (142), Expect = 4e-14
 Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 10  FLAQRTPLLRTLERMVNNPSTAEDLLQETYLRVTRALNERTVDHLE-PFVFQTARNLALD 68
           F+  R  L++   R+    S AED++Q+ Y R+  A    +    +  ++FQ  RNLA+D
Sbjct: 18  FVDNRLILVKIAARITGCRSRAEDVVQDAYFRLQSAPTITSSFKAQLSYLFQIVRNLAID 77

Query: 69  HLRARRIQSR-TLLEDVPVDVVNNVVAPQSSAEDAAHAGRMLERLNVSLQALSSRQQQIF 127
           H R + ++ + +  E+  ++VV +  +P++S  +       LE +  +L  L  R +  F
Sbjct: 78  HYRKQALELKYSGTEEEGLNVVIHGASPETSHINF----NTLENIADALTELPQRTRYAF 133

Query: 128 MLSRLQGHAYQEIAERLGVSPSTVQKELKLIMAIC 162
            + RL G   ++IA+ LGVSP+ V   ++  +  C
Sbjct: 134 EMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHC 168