Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. RS175

Subject, 304 a.a., amino acid/amide ABC transporter membrane protein 1, HAAT family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  343 bits (879), Expect = 4e-99
 Identities = 171/301 (56%), Positives = 226/301 (75%), Gaps = 1/301 (0%)

Query: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGID 66
           F QQ+VNGLT+GS Y LIAIGYTMVYGIIGMINFAHG+VYMI +Y+A I LA L+  G++
Sbjct: 5   FLQQMVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVE 64

Query: 67  SLPLLMTAAFVASIIVTSAYGYSIERVAYRPLRSSNRLIPLISAIGMSIFLQNTVLLSQD 126
           S P L+    V +I+VT  YG+ IERVAY+PLR+S RL PLISAIG+S+ LQN   +SQ 
Sbjct: 65  SFPFLILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 127 SKDKSIPNLIPGSFSFGPGGAEEVLVSYMQILVFVVTLVAMLGLTLFISRSRLGRACRAC 186
           ++ + +P L+ G++ F  G    V ++Y +I + +   V M  LT  I  ++LGR CRA 
Sbjct: 125 ARQQGVPTLLEGAWRFEVGSGF-VQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRAT 183

Query: 187 AEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAV 246
            +D KMA++LGINT+ +I+  F+IGAA+AA+A VL++M YG  +  AGF++G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243

Query: 247 LGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEK 306
           LGGIGS+PGAMLGGL+LGVAE+  + +    YKDV +FGLLVL+L+FRP G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFGLLVLILIFRPQGLLGRPLVAK 303

Query: 307 V 307
           V
Sbjct: 304 V 304