Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. RS175

Subject, 304 a.a., Branched-chain amino acid ABC-type transport system, permease components from Enterobacter asburiae PDN3

 Score =  342 bits (877), Expect = 6e-99
 Identities = 173/301 (57%), Positives = 223/301 (74%), Gaps = 1/301 (0%)

Query: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGID 66
           F QQL+NGLT+GS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y+  I LA L+  G+ 
Sbjct: 5   FLQQLINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLQ 64

Query: 67  SLPLLMTAAFVASIIVTSAYGYSIERVAYRPLRSSNRLIPLISAIGMSIFLQNTVLLSQD 126
           S PLL+    V +I+VT  YG++IER+AY+PLR+S RL PLISAIGMS+ LQN   LSQ 
Sbjct: 65  SFPLLILGTLVFTIVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQLSQG 124

Query: 127 SKDKSIPNLIPGSFSFGPGGAEEVLVSYMQILVFVVTLVAMLGLTLFISRSRLGRACRAC 186
            + + +P ++ G      G    V ++Y ++ + V +   ML LT  I+ +RLGR CRA 
Sbjct: 125 PRQQGVPTMLDGVIRLHLGDGF-VQITYTKVFILVASFAGMLVLTWIINHTRLGRMCRAV 183

Query: 187 AEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAV 246
            +D KMA++LGINT+ II+L FVIGAA+A +A VL++M YG  +   GF++G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYVGFVIGIKAFTAAV 243

Query: 247 LGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEK 306
           LGGIGS+PGAMLGGL+LGVAEA  + +    YKDV +FGLLV++L+FRP G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFGLLVMILIFRPQGLLGRPIVAK 303

Query: 307 V 307
           V
Sbjct: 304 V 304