Pairwise Alignments

Query, 402 a.a., Na(+), Li(+), K(+)/H(+) antiporter from Pseudomonas sp. RS175

Subject, 395 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  215 bits (547), Expect = 2e-60
 Identities = 122/384 (31%), Positives = 212/384 (55%), Gaps = 4/384 (1%)

Query: 19  RPVVLLLSATFVLTIARAMALPYLVVYFSQAFGLGVTDIGLVVGGALIVSSVLGVYGGFL 78
           R    LL+++ +LTI R   LP++ +Y S+ + L V  IG  +  AL +  V  +  G L
Sbjct: 7   RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGIL 66

Query: 79  VDRFSNDRILLAAASLFALAFAVAFQVGSLVPFIIAIVVVNLSYAVVDIAVKSGIGFLVT 138
            D+F   R +L A + FA  F     V ++   ++   ++N +Y+V    +K+     ++
Sbjct: 67  ADKFDKKRYMLLAITAFASGFIAITLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLS 126

Query: 139 PDKRGGVFSMKYTLTNVGYAIGPFLGVLFAKISPGMPFAVSAIIGAGFVAFYSSLGARLP 198
              +  +FS+ YT+ N+G+ IGP LG L    S  +PF ++AI  A  + F      R  
Sbjct: 127 STSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVKRSE 186

Query: 199 RAGQTERTNQPFARVLVHLVRNYRLVCFTIGGVLSAIVFGQFTAYLSQYLIVTSTPENTY 258
           +   TE  +    +V   L+++  L+ FT  G L++ V G F + +SQY++V +  +   
Sbjct: 187 KIIATETGSVWSPKV---LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDFAE 243

Query: 259 RIINYLVTTNACVVIGLQYLIGSRIHQKNLFRMLMLGMAFFIAGLMGFAHA-QAWMAWVV 317
           +++  ++  NA +V+ LQY +G R++  N+  ++  G   F+ GL+GF  +  + + W +
Sbjct: 244 KVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLLWGM 303

Query: 318 AMIIFTVGEIIIIPAEYLFIDYIAPEDMRGVYYGAQNLSNLGAALGPVLCGFVLSLYAPQ 377
           +  +FTVGEII  P EY+ ID+IAP +M+  Y+ AQ+L  LGAA+ P++ G VL+   P 
Sbjct: 304 SAAVFTVGEIIYAPGEYMLIDHIAPPEMKASYFSAQSLGWLGAAINPLVSGVVLTSLPPS 363

Query: 378 AMFHVLSLCVVAASVFYFLGSRRK 401
           ++F +L+L ++AA V    G R +
Sbjct: 364 SLFVILALVIIAAWVLMLKGIRAR 387