Pairwise Alignments

Query, 339 a.a., Motility protein B from Pseudomonas lactucae CFBP13502

Subject, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC100

 Score =  213 bits (541), Expect = 7e-60
 Identities = 120/313 (38%), Positives = 181/313 (57%), Gaps = 27/313 (8%)

Query: 7   IIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKDPIGF 66
           I++KR K  + G   G+WKIA+ADF TAMMAFFLV+WL+S ++P++ I IA YF+ P+  
Sbjct: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68

Query: 67  SESGTPFV------IDLGGSPELAPERTINPEVKTEAPQEKIPIERDTVETMAEQVEQER 120
           + +G   +      I  GG      +  +N              ++  +E + +++EQ R
Sbjct: 69  AVTGGDRISNSESPIPGGGDDYTQSQGEVN--------------KQPNIEELKKRMEQSR 114

Query: 121 LELLLQELQNKVEENPQMMKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFED 180
           L  L  +L   +E +P++   +  +  ++  EGLRIQI D+ NRPMF +GSA ++PY  D
Sbjct: 115 LRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRD 174

Query: 181 ILLAMADTIKTVPNKISISGHTDAKPYA-GQGDFGNWELSANRANAARRALVAGSYPDPQ 239
           IL A+A  +  +PN+IS+SGHTD  PYA G+  + NWELSA+RANA+RR L+ G     +
Sbjct: 175 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGK 234

Query: 240 VARVVGFASSQLFDHKDPFNPANRRIDIVVLTKKAQRAI------EGDQPPPPQPTPGAG 293
           V RVVG A++     + P +  NRRI ++VL K+A++AI        ++P      P   
Sbjct: 235 VLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVA 294

Query: 294 APGEVPADPNAIP 306
               VP  P+A P
Sbjct: 295 PQVSVPTMPSAEP 307