Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. DMC3

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECOR38

 Score =  238 bits (608), Expect = 3e-67
 Identities = 162/522 (31%), Positives = 262/522 (50%), Gaps = 41/522 (7%)

Query: 1   MRNNQPITQRERTFPAQQRLISTTDAKGVITYCNDDFVEISGFSREELIRAPHNLVRHPD 60
           M ++  +TQ+         L+STTD +  IT+ ND FV++SGF+ +EL   PHN+VRHPD
Sbjct: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD 60

Query: 61  VPSAVFSHMWGTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPVFDGNQVIGYESVRVKPTA 120
           +P A F+ MW TLK+G PW GIVKNR K+GDHYWV A   P+    ++ GY S+R + T 
Sbjct: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120

Query: 121 EQIRRAEALYQRINQGKSAIPSTDKWLPLLQDW------------------LPFILVSQL 162
           E+I   E LY+ +N G+++     K L + + W                  L FIL++ +
Sbjct: 121 EEIAAVEPLYKALNAGRTS-KRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAM 179

Query: 163 SFMIGATLNSQWGFALAAALSVPLGLMGLQWQ-QRGLKRLLRLAEQTTSDPLIAQMYTDS 221
            + + A + + +       L V L     +WQ  R ++ + R A +  +    +  +  +
Sbjct: 180 LWFVAAPVVTYF----LCVLVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHL-N 234

Query: 222 RGAQARLEMSILSQEARLKTCLTRLQDTAEHLTDQAKQSDALAHNSSTGLERQRVETEQV 281
           R  +  L +  + Q   +  C   + D +  ++     S+ LA     G +     T+Q 
Sbjct: 235 RSDELGLTLRAVGQLGLM--CRWLINDVSSQVSSVRNGSETLA----KGTDELNEHTQQT 288

Query: 282 ATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVVVGETGLTV 341
              V Q  AT  ++A+ V++ +     A++L+    + A +  EA   ++ V+     T+
Sbjct: 289 VDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEA---MTTVI----KTM 341

Query: 342 TQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTS 401
             +A  +  IG +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA R++
Sbjct: 342 DDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSA 401

Query: 402 ESTGQIHALIAKLQQTASSAVQTMEAGHRQAEEGVARVLEADQALVGISEAVANITDMTT 461
            +   I  LI        S  Q + A  R  E+ VA+V    Q +  IS +     D  +
Sbjct: 402 NAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLS 461

Query: 462 QIAAATEEQSAVAEEISRNISNISELADQTSEQAHNSALLSE 503
            +  A +E + + +   +N   + E A  ++   H ++ L +
Sbjct: 462 SLTRAVDELNLITQ---KNAELVEESAQVSAMVKHRASRLED 500



 Score = 35.0 bits (79), Expect = 6e-06
 Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 2/185 (1%)

Query: 326 AIQRLSVVVGETGLTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRG 385
           A Q L V  GE   +V  L + SDE+G  +  +  +      L  + + + +        
Sbjct: 216 ARQALKVATGERN-SVEHLNR-SDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSET 273

Query: 386 FAVVADEVRQLAQRTSESTGQIHALIAKLQQTASSAVQTMEAGHRQAEEGVARVLEADQA 445
            A   DE+ +  Q+T ++  Q  A + ++  +      T  A  + +       ++  +A
Sbjct: 274 LAKGTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEA 333

Query: 446 LVGISEAVANITDMTTQIAAATEEQSAVAEEISRNISNISELADQTSEQAHNSALLSEEL 505
           +  + + + +I D T +I   T   + +A + +    N +  A +  EQ    A+++ E+
Sbjct: 334 MTTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEV 393

Query: 506 TKTAN 510
              A+
Sbjct: 394 RHLAS 398