Pairwise Alignments

Query, 592 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Pseudomonas sp. DMC3

Subject, 598 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens GW456-L13

 Score =  659 bits (1701), Expect = 0.0
 Identities = 340/598 (56%), Positives = 420/598 (70%), Gaps = 8/598 (1%)

Query: 1   MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR 60
           M +YKAPLRDMRF+++ VF+    +A L A   + D   V AILEE  K     ++PL+R
Sbjct: 1   MPEYKAPLRDMRFLIDHVFDFHSNYAALGATDASPDM--VNAILEEGAKFCENVLSPLNR 58

Query: 61  AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNS 120
           + DEEGCH+ +G VTTPAGF QA+  Y EGGW G+  DP YGG G+P ++   + EMV S
Sbjct: 59  SGDEEGCHFDNGVVTTPAGFKQAFAQYVEGGWHGLAADPVYGGQGLPISLGLVISEMVAS 118

Query: 121 ASLAFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGIWAGSMCLTEPHAGTDLGIIRT 180
           ++ ++G+YP LT GA  +I+AH +E  K  YL  + AG W G+MCLTE H GTDLGII+T
Sbjct: 119 SNTSWGMYPGLTHGAMSAIHAHGTEAQKKTYLKKLTAGQWTGTMCLTEAHCGTDLGIIKT 178

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA 240
           +A P ADGSY +SG+KIFI+ GEHD++ NIIHLVLAKLPDAPAG KGISLF+VPK++ +A
Sbjct: 179 RAVPAADGSYAISGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKYLPDA 238

Query: 241 DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV 300
            G  G RN  +CGSIEHKMGI+ASATCV+NFDEA G+L+GEPNKGL  MFTMMN+ RLG 
Sbjct: 239 TGEAGERNGVSCGSIEHKMGIKASATCVLNFDEAKGFLIGEPNKGLNCMFTMMNHARLGT 298

Query: 301 GIQGLATGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG 360
           G+QGL  GE S+Q A++YA DRLQ RS TG +  +KVADPIIVHPDVRRMLLTMKA NEG
Sbjct: 299 GMQGLCLGEASFQGAIKYANDRLQMRSLTGPKAPEKVADPIIVHPDVRRMLLTMKAFNEG 358

Query: 361 GRAFSTYVAMQLDTAKFSEDATTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGH 420
            RA + + A  LD A  S D T R+ AEDL+A LTP+ KAF+TD GLE T HG Q+FGGH
Sbjct: 359 NRALTYFTAQLLDVAHLSPDETARRDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGH 418

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYQLFADEIRHFTATAS 480
           G+IREWG EQLVRD RI  IYEGTNGIQALDL+GRK++GS G   + F   +  F A  +
Sbjct: 419 GFIREWGMEQLVRDCRIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAANA 478

Query: 481 --ADLGEFTKPLNDAVDTLDELTAWLLDRAKNNPNEIGAASVEYLQAFGYTAYAYMW--- 535
               L  +   LN       ELT  +   A  NP+E+GAASV+YL   GY    Y+W   
Sbjct: 479 EHPQLAGYVAQLNQLNQQWGELTTRVGMAAMKNPDEVGAASVDYLMYSGYIILGYLWLRM 538

Query: 536 ALMAKASLGKEAQD-DFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAAQF 592
           AL+A+A L   + D DF  +KL T  FYF RLLPR  +  A+V+AGS+ L  L A  F
Sbjct: 539 ALVAQAQLDAGSGDGDFCRAKLATNEFYFKRLLPRTAAHRAAVEAGSDCLMQLPAELF 596