Pairwise Alignments

Query, 592 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Pseudomonas sp. DMC3

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  581 bits (1498), Expect = e-170
 Identities = 305/597 (51%), Positives = 398/597 (66%), Gaps = 16/597 (2%)

Query: 3   DYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSRAA 62
           +Y+APLRDMRFVL+E+F+++        L   +D +T++ ILEEA + T + IAPL+R +
Sbjct: 2   NYQAPLRDMRFVLHELFDLS---GHCQQLGIELDRDTLDGILEEAARFTGQIIAPLNRNS 58

Query: 63  DEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPAYGGMGMPKAVSAQVEEMVNSAS 122
           DE+GC W  G VTTP G   AY+ Y E GW  + G  AYGG G+P+  SA   EM+ +AS
Sbjct: 59  DEQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAAS 118

Query: 123 LAFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGIWAGSMCLTEPHAGTDLGIIRTKA 182
           L+F +Y  LT GA L+++ H SE LK AYL  M +G WAG+MCLTEP AGTDL ++RT+A
Sbjct: 119 LSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRA 178

Query: 183 EPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADG 242
           +P+ADGSY+++G+KIFI+GGE DLT+NI+HLVLA+LPDAPAG +GISLFLVPK +     
Sbjct: 179 QPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG--- 235

Query: 243 SLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGVGI 302
             G RN   CG++EHKMGI+ ++TCVMNFD A G+LVGE N+GLA MFTMMN  R  VG+
Sbjct: 236 --GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGL 293

Query: 303 QGLATGERSYQNAVEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEGGR 362
           QGL   E ++Q  + YAR+RLQSRS  G    +K ADPIIVHPDVRRMLLT K   EG R
Sbjct: 294 QGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCR 353

Query: 363 AFSTYVAMQLDTAKFSEDATTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQIFGGHGY 422
               Y A QLD    ++ A  R+ A    ALL P+ KAF TD+G E    G Q++GGHGY
Sbjct: 354 MLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGY 413

Query: 423 IREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYQLFADEIRHFTATASAD 482
           IREWG EQL+RD RITQ+YEGTNGIQALDL+ RK++G GGA   L  DE+      A+A 
Sbjct: 414 IREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANA- 472

Query: 483 LGEFTKPLNDAVDTLDE---LTAWLLDRAKNNPNEIGAASVEYLQAFGYTAYAYMW---A 536
           LG            L+E   L+  +++  + +P E GA SV++L    Y   A MW   A
Sbjct: 473 LGGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAA 532

Query: 537 LMAKASLGK-EAQDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDAAQF 592
           + A+A+L    A+  FY +KL  A FY+ R+LPR  +   ++  G++ L  L A+ F
Sbjct: 533 VRAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589