Pairwise Alignments

Query, 436 a.a., D-galactonate transporter from Pseudomonas sp. DMC3

Subject, 444 a.a., putative galactarate transporter from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  365 bits (937), Expect = e-105
 Identities = 177/428 (41%), Positives = 266/428 (62%), Gaps = 11/428 (2%)

Query: 19  RFFIMVLLFITVVINYLDRSNLSIAAPALTSELGIDPVHVGLIFSAFGWTYAAMQIPGGW 78
           R+ I++++FI   +NY DR+ LSIA   +  EL +  V +G IFSAFGW Y  MQIPGGW
Sbjct: 16  RYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPGGW 75

Query: 79  LVDRVPPRILYSVALLLWSVATVMLGFVSSF------IALFVLRMAVGALEAPAYPINSR 132
           L+D+   + +Y+ +L  WS+ T + GFV  F      I++F +R  +G  EAP++P N+R
Sbjct: 76  LLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRFMLGFSEAPSFPANAR 135

Query: 133 VVTTWFPERERATAIGFYTSGQFVGLAFLTPVLAWLQHAFGWHMVFVATGAVGILWAVIW 192
           +V  WFP +ER TA   + S Q+  LA  +P+L WL  A+GW  VF   G +G +   +W
Sbjct: 136 IVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHVFTVMGVIGFVLTALW 195

Query: 193 YTVYREPRDFKGTNQAEIDLIREGGGLVDIQAETAKVKARFSWTDLGIV---LSKRKLWG 249
             +   P D    +  E+  I E G +VD+  +     A  S   L  +   LS R + G
Sbjct: 196 IKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPG-SAAASGPKLHYIKQLLSNRMMLG 254

Query: 250 IYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGFFSDFLI 309
           ++ GQ+ +N+  WFFLTWFP YLV+ +GM  +K GL+AS+P L  F G +  G FSD+LI
Sbjct: 255 VFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLI 314

Query: 310 RRGYTVGFARKLPIIGGLLISTSIIGANFVESTPLVIAFLALAFFGNGLASITWSLVSTL 369
           +RG ++  ARKLPI+ G+L++++II  N+  +T LV+  +ALAFFG G  ++ W ++S  
Sbjct: 315 KRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISDT 374

Query: 370 APARLLGLTGGVFNFIGNLSAIATPIVIGFLASG-DSFAPAITYIAVLALVGALSYVLLV 428
           AP  ++GL GGVFN  GN+++I TP+VIG+L S   SF  A+ ++   AL+  + Y+ +V
Sbjct: 375 APKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVV 434

Query: 429 GKVERIEL 436
           G ++R+EL
Sbjct: 435 GDIKRMEL 442