Pairwise Alignments

Query, 254 a.a., HTH-type transcriptional repressor NanR from Pseudomonas sp. DMC3

Subject, 250 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  408 bits (1049), Expect = e-119
 Identities = 214/254 (84%), Positives = 231/254 (90%), Gaps = 4/254 (1%)

Query: 1   MKRQPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLMPGDRLVERDLCDRLGVSRTSVRE 60
           MKRQPLDDSFKVNRNPVTLREIVLDKLR+AIMNF L+PGDRLVERDLCDRLGVSRTSVRE
Sbjct: 1   MKRQPLDDSFKVNRNPVTLREIVLDKLRTAIMNFHLLPGDRLVERDLCDRLGVSRTSVRE 60

Query: 61  ALRHLESEGLVEFADAKGPRVAIITLDDAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE 120
           ALRHLESEGLVEFADAKGPRVAIITL+DA DIYELRCVLEGLIVQLFTL AKAKDI+ALE
Sbjct: 61  ALRHLESEGLVEFADAKGPRVAIITLEDARDIYELRCVLEGLIVQLFTLNAKAKDIRALE 120

Query: 121 KALDDNRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE 180
           +AL+ NR+AL++GELQQV+DSVQGFYDVLLEGSGN VAA QLRQLQARISYLRATSVSQE
Sbjct: 121 RALEVNREALEEGELQQVLDSVQGFYDVLLEGSGNQVAAQQLRQLQARISYLRATSVSQE 180

Query: 181 NRRGASNHEMEKMVEAIKSGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGVAVKGTPA 240
           NRRGASN EMEK+VEAIK GDPL AHQA VDHVRAAA VALDYL++KQ++          
Sbjct: 181 NRRGASNREMEKIVEAIKGGDPLVAHQASVDHVRAAAKVALDYLRQKQDDNA----KVRD 236

Query: 241 ITLPIALKEPRIGQ 254
           I  P+ALKEPRIG+
Sbjct: 237 IVEPLALKEPRIGR 250