Pairwise Alignments

Query, 254 a.a., HTH-type transcriptional repressor NanR from Pseudomonas sp. DMC3

Subject, 239 a.a., FadR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 24/229 (10%)

Query: 5   PLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLMPGDRLV-ERDLCDRLGVSRTSVREALR 63
           P+D +    R    L + V+D L   I+  QL PG++L  E  +    GVSRT VREAL 
Sbjct: 2   PIDSAAPPRRRSTNLAQGVVDALTQRILLGQLKPGEKLPSESTIVLEHGVSRTVVREALS 61

Query: 64  HLESEGLVEFADA-----------KGPRVAIITLDDAVDIYELRCVLEGLIVQLFTLRAK 112
            L++ GLVE               +G R+ + T+    ++ ELR  LE   V L  LR  
Sbjct: 62  KLQASGLVETRHGIGTFVLVQQAQQGLRLHVDTVASVRNMLELRLGLEVQAVALAALRRT 121

Query: 113 AKDIKALEKALDDNRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYL 172
            + +  + +ALDD + +L + +    ++  + F+ ++ E +GN    T++  L    + +
Sbjct: 122 GEQLAHMRQALDDYQASLANND--SCVEEDKRFHQLIAEATGN-TFFTEI-MLHLGNAMI 177

Query: 173 RATSVSQENRRGA--------SNHEMEKMVEAIKSGDPLAAHQACVDHV 213
             T V  + R GA        +N E E +  AIK  DP AA  A V H+
Sbjct: 178 PRTQVKGDERGGADFAKLGQLANLEHEAIFNAIKRQDPDAARAAMVLHL 226