Pairwise Alignments

Query, 380 a.a., Spermidine/putrescine import ATP-binding protein PotA from Pseudomonas sp. DMC3

Subject, 385 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  376 bits (965), Expect = e-109
 Identities = 203/386 (52%), Positives = 272/386 (70%), Gaps = 11/386 (2%)

Query: 1   MANASSTYRKALEGQQQPKKV-LVKVDRVTKKFDETVAVDDVSLEIHQGEIFALLGGSGS 59
           MA      ++       P  V  ++ + VTK+F + VAV++++L+I++ E F+LLG SG 
Sbjct: 1   MAKTLGPVKRKFSPWDNPDAVPFIRFENVTKRFGDFVAVNNLTLDIYEREFFSLLGPSGC 60

Query: 60  GKSTLLRMLAGFERPTEGRILLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGL 119
           GK+TL+RMLAGFE PTEGRILL G DI+ +PPY+RP NMMFQSYALFPHM+V +N+AFGL
Sbjct: 61  GKTTLMRMLAGFEEPTEGRILLQGKDISGVPPYKRPTNMMFQSYALFPHMSVEKNVAFGL 120

Query: 120 KQDRLPASEIDARVEEMLRLVHMTQYAKRRPHQLSGGQRQRVALARSLAKRPKLLLLDEP 179
           +QD LP ++I ARVEEMLRLV +T++AKR+P QLSGGQRQRVALARSLAKRPK+LLLDEP
Sbjct: 121 EQDGLPKADIAARVEEMLRLVKLTEFAKRKPSQLSGGQRQRVALARSLAKRPKVLLLDEP 180

Query: 180 MGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVD 239
           +GALDKKLR + Q EL++I   +G+T ++VTHDQEEAMT++ RIA+M  G + Q+ +P +
Sbjct: 181 LGALDKKLREETQFELMDIQTNLGLTFLIVTHDQEEAMTVSDRIAVMDKGNVVQVATPAE 240

Query: 240 IYEAPVSRMVCEFIGNVNAFDGTVVEDLEGHAIIHSPDLQQKIYVGHGVS-----TSVQD 294
           IYEAP +R V +FIG++N FD  VV +      I  P L      G  VS      +   
Sbjct: 241 IYEAPNTRYVADFIGDINIFDAHVVANASD---IGKPGLVTMDCDGLKVSVEQECAAAAG 297

Query: 295 KSITYAIRPEKMLVSTTQP-EFRYNWSEGKVHDIAYLGGHSVFYVELPGGKIVQSFMANA 353
             + YAIRPEK+ +S  QP +   N + G+V DI YLG  SVF V+L  G+++++  AN 
Sbjct: 298 SQVAYAIRPEKVRISLDQPADSSINSAYGEVWDIGYLGDFSVFIVKLADGRVIRAAQANV 357

Query: 354 ERRGARP-TWDDKVYVWWEDDSGVVL 378
            R   RP T+ D V++ W+ DSG+VL
Sbjct: 358 SRLVDRPITFGDMVWLNWKPDSGLVL 383