Pairwise Alignments

Query, 629 a.a., Acetoin catabolism regulatory protein from Pseudomonas sp. DMC3

Subject, 603 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  336 bits (861), Expect = 2e-96
 Identities = 227/612 (37%), Positives = 335/612 (54%), Gaps = 29/612 (4%)

Query: 27  AADLAITRSWRRCLDQYQLDPASRRAPDVLEQARLREHRAPLEHIISVAHWQMNSLHQQ- 85
           A D  I  SWRRC   + LD  S  + D L    + +       ++   H ++   ++  
Sbjct: 6   AHDTLIQESWRRCR-AFGLDHQSTPSFDQLPAEGISQLLESQHSLVQTTHQEVLPYYENI 64

Query: 86  LGRDGHVVLLTDARGVAIDSVFNEAERGEFQRSGLWLGSVWSEEHEGTNGVGTCLVERQH 145
           L     +++L D +G  + S   +         G   G+ W E   GTN +GT L   Q 
Sbjct: 65  LSNSNCLIMLADNQGQVLTSWGTQRFIEPKLARGFNPGASWRERSSGTNAIGTALACAQA 124

Query: 146 VTIRRDEHFRGQHVGLTCSASPIFDASGELLAVLNLSSVREDSSLEQRFKAMALTNLSAR 205
           V I  DEHF   +  +T SA+PIFDA  E++AVL++SS   DS L      + +  + ++
Sbjct: 125 VHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSS---DSYLPPSH-TLGMVKMMSQ 180

Query: 206 LIESCFFLG-HDPQRYLLRFHPDAGFVGLLGEGLLSFDESARICSVNAAALDLLGLSREQ 264
            +E+   L     + + L F+     +     GLL FDES ++ S N  A +LLG+S  +
Sbjct: 181 TVENRLILNLFRGEHFQLTFNTGLSNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR 240

Query: 265 MVGQSLTMLLETPMEQLLDQASAQAHVCWPMRLADGRLFYGQLREPIR---SAPLTLAPV 321
           ++  SL    +  + +LL+Q      + + ++ A    F   LR P +    A +   P 
Sbjct: 241 VMIDSL---FKVSLLELLNQPEG---LPFSLQAAGRNRFQCLLRRPKQVPVQARVFTEPT 294

Query: 322 PPIKDERVCLE-----DSRLQRGFARALRVLERDVPVFLQGETGTGKEAFAAALHRASSR 376
           PP K   + L+     D R+++   +A R+LE+D+P+ + GETG GKE F  ALH+ASSR
Sbjct: 295 PP-KPASIGLKTLHFGDVRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSR 353

Query: 377 AGQPFVAINCAAIPETLIESELFGYRGGSFTGARKDGMVGKLEQAHGGILFLDEIGDMPL 436
           + + F+A+NCAAIP  L+ESELFGY  G+FTGA + G +G + +A  G LFLDEIGDMPL
Sbjct: 354 SQKAFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPL 413

Query: 437 ALQTRLLRVLEERQVVPLGSATPRPLDVRLISASHQNLPACVADGRLREDLFYRIGGFAV 496
             Q RLLRVL+ER V P+GS+   P+D+R+ISA+++ L   V  GR REDL+YRIGG  +
Sbjct: 414 PTQARLLRVLQERCVQPVGSSELFPVDLRIISATNRALRELVQAGRFREDLYYRIGGLTL 473

Query: 497 ELPPLRERSDKGRLLDLLLREEAAGAT-VRLQAGVRERLLAQPWPGNVRQLRTCLRTLVA 555
           ELPPLRER+DK  L   L ++         L A V       PWPGN+RQ+ + L+  +A
Sbjct: 474 ELPPLRERTDKRALFQQLWQQHREPTQWAGLSAEVLALFEQHPWPGNLRQVSSVLQVALA 533

Query: 556 LAVEGRVTLEDVHELLPASDDQPVDDPLGVSE----RQTLLSMIEAEHWHVARVARRLGI 611
           +A E  +  E + +      D  V+ PL  SE       L   ++A   +++ +AR LG+
Sbjct: 534 MAEEQPIRPEHLPD--DFFVDLNVESPLPASEYLDASIDLNQRLKAVGGNISHLARELGV 591

Query: 612 SRNTLYRKLRQH 623
           SRNTLY++LRQH
Sbjct: 592 SRNTLYKRLRQH 603