Pairwise Alignments

Query, 727 a.a., DNA helicase II from Pseudomonas fluorescens SBW25

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  489 bits (1260), Expect = e-142
 Identities = 283/751 (37%), Positives = 428/751 (56%), Gaps = 35/751 (4%)

Query: 9   LNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVTFTNKA 68
           L  LN  QR+AV    G  +++AGAGSGKTRVL  RIA LI+ +N  P  IL++TFTNKA
Sbjct: 4   LEGLNPPQREAVEHTEGPLMIIAGAGSGKTRVLTFRIAHLIRAKNVDPFQILALTFTNKA 63

Query: 69  AAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDDQQRLVKRV 128
           A+EMR+RIE+L+G+     W+GTFH +  ++LR   ++ G    F I D+DD + L+K +
Sbjct: 64  ASEMRNRIERLIGLEARNTWMGTFHSIFAKILRVESEKLGFPSNFTIYDTDDSKSLIKSI 123

Query: 129 IRELGLDEQRWPARQAQWFINGQK------DEGLRPQHIQASGDLFLAT-MRSIYEAYEA 181
           ++E  LD++ +        I+G K      +  +   +I+A  +  +   M  IY AY+ 
Sbjct: 124 VKEKRLDDKVYKPNTVLSRISGAKNRLISWENYINDPYIKADDEAAMKPRMGEIYRAYQK 183

Query: 182 ACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAKG 241
              ++  +DF +LL     L+RD+P +L  YQ+RFR++LVDEFQDTN  QY   + LA  
Sbjct: 184 RLFKSSAMDFDDLLFNTNVLFRDHPDVLNKYQQRFRYVLVDEFQDTNLSQYLITKKLAAV 243

Query: 242 GDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIAN 301
             ++ VVGDD QSIY +RGA I+NI  + +D+PD   ++LEQNYRST  I++AAN++I  
Sbjct: 244 HQNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLHVVKLEQNYRSTKNIVEAANSIIEK 303

Query: 302 NTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETI-ESALKTGLARSDIAILYRSNA 360
           N  +L K +WT  G G+ I L  + ++++E R V  TI E      L  SD AILYR+N+
Sbjct: 304 NKAQLKKNVWTQNGNGDLIELIKSASDNEEGRMVASTIFEEKNNKKLQNSDFAILYRTNS 363

Query: 361 QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI 420
           QSR LEEAL +  I Y+I GG  F++R EIK+ MAY R +  + ++ A +R+IN P RGI
Sbjct: 364 QSRALEEALRKMNISYKIVGGLSFYQRKEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGI 423

Query: 421 GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH 480
           G  +VE +   A   D+ +W+   +  ++  L+GRA+ ++  F  +I++   +      +
Sbjct: 424 GLSSVEKMMVAAYEHDIPLWQV--VTNSSSFLSGRASNSVSDFATMIKSFQMEVERKDAY 481

Query: 481 LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA 540
               T+ +QSGL+     +K  +G  R EN++EL++A + + +  E+E+   L AFL   
Sbjct: 482 EAASTIAKQSGLLRELYEDKTIEGLNRYENVQELLNAIKEYVDNPENEDKN-LGAFLQEI 540

Query: 541 SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL 600
           +L   + +  +  D++ LMT+HS+KGLEF  VF+VG+EE LFP +M ++    LEEERRL
Sbjct: 541 ALLTDNDRDKDEMDAVTLMTIHSSKGLEFRQVFVVGLEEDLFPSQMMMQSREDLEEERRL 600

Query: 601 AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQ--EVRLSNSVSRPFGG 658
            YV  TRAM+ L ++YA TR  +G     + SRF+ E+    I+  + R        FG 
Sbjct: 601 FYVATTRAMEKLYLSYAITRYRFGRLLNCEPSRFLEEIDPSCIRVTKRRGQQPTGSHFGR 660

Query: 659 GQQQNSSSMFAGSEIPE---------------------TQFSLGQQVRHSVFGEGVILNF 697
                  S F G + P                      +  + G +V H  FG G +L  
Sbjct: 661 NNDSEGRSGFVGLKTPSVRKNTTAKVHTPSPDFKPSNTSNLAAGMKVEHPKFGFGKVLKV 720

Query: 698 EGAGAQARVQVNFAE-GSKWLMMGYAKLEAI 727
           E  G   +  + F   G K L++ +AKL  +
Sbjct: 721 EVEGLNKKATIGFDNFGEKTLLLSFAKLRIV 751