Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas fluorescens SBW25

Subject, 420 a.a., diaminopimelate decarboxylase, PLP-binding (NCBI) from Escherichia coli BW25113

 Score =  178 bits (452), Expect = 2e-49
 Identities = 147/433 (33%), Positives = 219/433 (50%), Gaps = 49/433 (11%)

Query: 8   DGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVKANSNLGV 67
           D +L AE   L  +   FG P +VY    I  Q  +          +V +A KA SN+ +
Sbjct: 9   DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQF-----DVVRFAQKACSNIHI 61

Query: 68  LNVLARLGAGFDIVSRGELERVLAAGGKA----DKIVFSGVGKTREDMRRALEVGVHCFN 123
           L ++   G   D VS GE+ER LAAG       D IVF+     +  + R  E+ +   N
Sbjct: 62  LRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPV-N 120

Query: 124 IESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYI 183
             S D L++L  V+   G R  + LRVNP    G     +TG + +K GI   D     +
Sbjct: 121 AGSVDMLDQLGQVSP--GHR--VWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAA-L 175

Query: 184 RAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLL-ALIDRLGECGIYLHHIDLGGGVGV 242
              Q  +L+++G+  HIGS +         L+++  A++ ++ E G  L  I  GGG+ V
Sbjct: 176 DVIQRHHLQLVGIHMHIGSGVDYAH-----LEQVCGAMVRQVIEFGQDLQAISAGGGLSV 230

Query: 243 RYRDEEPPLIADYI----QAVRERIE---GRDLTLMFEPGRYIVANAGVLLTQVEYLKHT 295
            Y+  E  +  ++      A RE+I    G  + L  EPGR++VA +GVL+TQV  +K  
Sbjct: 231 PYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQM 290

Query: 296 EHKDFAIVDAAMNDLIRPALYQAWMNVTAVTPRNSEARAYD--------IVGPICETGDF 347
             + F +VDA  NDL+RPA+Y ++ +++A+    ++ R+ +        + GP+CE+GD 
Sbjct: 291 GSRHFVLVDAGFNDLMRPAMYGSYHHISALA---ADGRSLEHAPTVETVVAGPLCESGDV 347

Query: 348 LAKD-----RQLALEE---GDLLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRR 399
             +         AL E   GD L +H  GAYG  MSSNYN+R    EVL D  QA  +RR
Sbjct: 348 FTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407

Query: 400 RETVAELYAGESL 412
           R+T+ EL A E L
Sbjct: 408 RQTIEELLALELL 420