Pairwise Alignments

Query, 628 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens SBW25

Subject, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  895 bits (2313), Expect = 0.0
 Identities = 480/637 (75%), Positives = 513/637 (80%), Gaps = 24/637 (3%)

Query: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           MSFASLGLSEALVRAIEAAGYT+PTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120
           ERLFP GHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK+YARDL  VSACIFGGVGMN
Sbjct: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN 120

Query: 121 PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
           PQ+QA+++GVDVLVACPGRLLDL GQG VDL+HVEILVLDEADRMLDMGF+HDVKKVLAR
Sbjct: 121 PQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR 180

Query: 181 LPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRALL 240
           LPAKRQNLLFSATFS+DIT LA KLLHNPERIEVTPPNTTVERIEQRV+RL ASHKRALL
Sbjct: 181 LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL 240

Query: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGSV 300
           AHLIT GAWEQVLVFTRTKHGANRLAEYL+K GLTA AIHGNKSQNARTKALADFKA SV
Sbjct: 241 AHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSV 300

Query: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           R+LVATDIAARGLDIDQLPHVVNFELPNV+EDYVHRIGRTGRAGRSGEAISLVAPDEEKL
Sbjct: 301 RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360

Query: 361 LKSIERMTKQKIADGDLMGFDASAVEAEKPEVRERPDVRNPRNPRGPKGDGPNGGGGGGG 420
           LKSIER+TKQ+IADGDLMGFDAS VEAEKPE RERP   N R  R  +  G  G    GG
Sbjct: 361 LKSIERVTKQRIADGDLMGFDASQVEAEKPEARERPQ-NNGRGGRNQQARGEGGKDTNGG 419

Query: 421 RRDKGKDKG-----GKEKAPTNGRGERPAREQKPREGTPAREQRQPSQPPRAAADRAPDE 475
           R+DKGKDKG        K     +     + +KPR+     +Q   +  P+  ADR P+E
Sbjct: 420 RKDKGKDKGKARQQAAAKPDDKEKSGDKQQPRKPRDKKSRPQQASNNSVPKPPADRDPEE 479

Query: 476 FLDDDVDNFGNRVDYV-PQAKPAQGRGRRPGAPAQGAGAG----APRGGQPQGARQNGPR 530
           FLDD++DNFGNR DYV P     QGR RRPG   QG G G    +  GG  QG  +NG +
Sbjct: 480 FLDDELDNFGNRADYVSPYQGKNQGRNRRPGGAGQGQGQGNGQRSNAGG--QGQARNGGQ 537

Query: 531 NSSGGTTGTPPAKRSGPRNGAPRDGQARREDSRSNNRRPARDDQPRLSEPAVQNPR-GGP 589
             SGG    PP   +G   GA RDG   R        RPARDD  R  EPAV+NPR    
Sbjct: 538 PRSGGGEKRPPRANNG--GGARRDGGGGR-------GRPARDDAAR-QEPAVRNPRQPEK 587

Query: 590 APKIIHKESKADRFPTPEQLDQLPGRPRGEKPALLTR 626
            P II KESK DRFPTPEQLD LP RPRGE+PALLTR
Sbjct: 588 QPVIIRKESKLDRFPTPEQLDDLPSRPRGERPALLTR 624