Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase HrpB from Pseudomonas fluorescens SBW25

Subject, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas simiae WCS417

 Score =  252 bits (644), Expect = 9e-71
 Identities = 173/474 (36%), Positives = 254/474 (53%), Gaps = 35/474 (7%)

Query: 2   NSLPIDDVLPALRDALAIRHEAVLEAPPGAGKTTRVPLALLN----EPWLTGQTILMLEP 57
           +SLPI      +++AL      ++    G+GKTT++P   L     +  L G T    +P
Sbjct: 70  DSLPIAAKRDEIKEALNKHQVLIIAGETGSGKTTQLPKICLEIGRGQFGLIGHT----QP 125

Query: 58  RRLAARAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDG 117
           RR+AAR+ A R+A EL   +G  VGY++R + +   NT I+++T+GIL    Q+D  L+ 
Sbjct: 126 RRIAARSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQNDRYLER 185

Query: 118 VGLLIFDEFHERSLDADLALALSLNGRELFRDEQPLKILLMSATLEGERLASLLDDAPIL 177
              +I DE HERSL+ D  L      + L      LK+++ SAT++ ER +   DDAPI+
Sbjct: 186 YDTIIVDEAHERSLNIDFLLGYL---KTLLPRRPDLKVIITSATIDLERFSKHFDDAPIV 242

Query: 178 RSEGRMFPVQMRWGRPY-----QPGEFIEP--RVVQTILEALHD----------ETGSVL 220
              GR FPV   W RP      + G  +E    V Q IL  L +            G VL
Sbjct: 243 EVSGRTFPVDT-WYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAYERSERRSPGDVL 301

Query: 221 VFLPGQAEIRRVSQQLADALGDRTDVLLCPLHGELDLNAQRAAIDPAPAGKRKVVLATNI 280
           VFLPG+ EIR  ++ L  A    T++L  PL+  L    Q+      P   R+VVLATN+
Sbjct: 302 VFLPGEREIRDAAEVLRKAQLKHTEIL--PLYARLSPAEQQRIFQSHPG--RRVVLATNV 357

Query: 281 AETSLTINGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYR 340
           AETSLT+ G+R VID+G AR+ R+   + + RL  + IS+ASA QR GR GR+EPG+C R
Sbjct: 358 AETSLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVR 417

Query: 341 LWSEDQHEGLAAYGSAEILAADLAGLALQLARWGVTP-AQLVWLDVPPTAAYAQAQDLLQ 399
           L+SE+   G   +   EIL  +LA + LQ+    +       +++ P   A +   +LLQ
Sbjct: 418 LYSEEDFIGRPEFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQ 477

Query: 400 RLGALN-DDTLTAHGQKMAELPAHPRIAHLLLRGQDLGLAATACDVAALLGERD 452
            L A++ +  LT  G+++A LP  PR+  +LL    LG       VA+ +  +D
Sbjct: 478 ELSAVDRNSQLTPLGRQLARLPVDPRMGRMLLEAAKLGSLQEVLIVASAMSIQD 531