Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase HrpB from Pseudomonas fluorescens SBW25

Subject, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

 Score = 1366 bits (3535), Expect = 0.0
 Identities = 704/842 (83%), Positives = 746/842 (88%), Gaps = 6/842 (0%)

Query: 1   MNSLPIDDVLPALRDALAIRHEAVLEAPPGAGKTTRVPLALLNEPWLTGQTILMLEPRRL 60
           M SLPID  LPALR AL  R E VLEAPPGAGKTTRVPLALL+EPWL GQ+ILMLEPRRL
Sbjct: 1   MISLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRL 60

Query: 61  AARAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDGVGL 120
           AARAAAERLASELGE+VGETVGYRIRLDSKVGP TRIEVVTEGILTRRLQ DPAL+GVGL
Sbjct: 61  AARAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGL 120

Query: 121 LIFDEFHERSLDADLALALSLNGRELFRDEQPLKILLMSATLEGERLASLLDDAPILRSE 180
           LIFDEFHERSLDADLALALSLNGREL RD+ PLKILLMSATLEGERL+ LLDDAP++ SE
Sbjct: 121 LIFDEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSE 180

Query: 181 GRMFPVQMRWGRPYQPGEFIEPRVVQTILEALHDETGSVLVFLPGQAEIRRVSQQLADAL 240
           GRM PV +RWGRP+QPGEFIEPRVV  +L AL D+ GSVLVFLPGQAEIRRV Q L + L
Sbjct: 181 GRMHPVDIRWGRPFQPGEFIEPRVVDCVLHALADQAGSVLVFLPGQAEIRRVHQSLQEVL 240

Query: 241 GDRTDVLLCPLHGELDLNAQRAAIDPAPAGKRKVVLATNIAETSLTINGVRVVIDAGLAR 300
           G R ++LLCPLHGELDLNAQRAAIDP   G RKVVLATNIAETSLTI+GVRVVIDAGLAR
Sbjct: 241 GARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVRVVIDAGLAR 300

Query: 301 VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEDQHEGLAAYGSAEILA 360
           VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSE QH+ LAA+GSAEIL 
Sbjct: 301 VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAHGSAEILQ 360

Query: 361 ADLAGLALQLARWGVTPAQLVWLDVPPTAAYAQAQDLLQRLGAL---NDDTLTAHGQKMA 417
           ADLAGLALQLARWGVTP QL WLD PP AAYAQAQDLL RL A    + DTL+ HGQ MA
Sbjct: 361 ADLAGLALQLARWGVTPEQLRWLDQPPAAAYAQAQDLLARLSAFRPGSRDTLSEHGQAMA 420

Query: 418 ELPAHPRIAHLLLRGQDLGLAATACDVAALLGERDILRGGGADLHSRLALLSGEER-ARG 476
           ELPAHPRIAHLLLRGQDLGLA  ACDVAALLGERDI RGGGADLHSRLAL+SGE + ARG
Sbjct: 421 ELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERDIQRGGGADLHSRLALVSGESKAARG 480

Query: 477 SQGGVQRAKQLARQYRGYLRGQAAQPVADPDHPRWLGALLALAYPDRVAQQRRPGGAEYR 536
            QGGVQRA+QLARQYRG LRG+   PVADPDHPRWLGALLALAYPDRVAQQRR GGAEYR
Sbjct: 481 GQGGVQRARQLARQYRGLLRGKVGAPVADPDHPRWLGALLALAYPDRVAQQRRAGGAEYR 540

Query: 537 LANGRAAVFAEADSLMKQPWLVIADLGSRQGQREERIYLAADFDPMLFDTVLAEQVCNVD 596
           LANGRAA+F E D+LMK PWLVIADLGSRQGQREERIYLAA+FDP L + VLAEQV  VD
Sbjct: 541 LANGRAALFGEVDALMKCPWLVIADLGSRQGQREERIYLAAEFDPALLEGVLAEQVERVD 600

Query: 597 QLDWDEREGVLRAERQRKVGELVLSREPLTGLDESARSQALVNLVRRKGLELLPWTPELR 656
            LDWDERE VLRAERQ KVGELVLSREPL GLD+ AR++AL+ LVRRKGL LL WTPELR
Sbjct: 601 ILDWDEREQVLRAERQVKVGELVLSREPLPGLDDEARTRALLGLVRRKGLNLLTWTPELR 660

Query: 657 QWQARVMLLRQLDAGKT--SEWPDISDKALLASLEHWLMPYLGKVSRLSHFASLDISSFL 714
           QWQARV LLRQLD  K   SEWPD+ D+ALLASLE WL PYL KVSRLSHFA+LD+ S L
Sbjct: 661 QWQARVALLRQLDLQKDGHSEWPDLGDEALLASLEDWLQPYLSKVSRLSHFAALDLPSML 720

Query: 715 HNLLPWPLPQRLDELAPQHVKVPSGSSVRLDYSEQPPILAVRLQELFGLADTPRIAGGRQ 774
            NLLPWPLPQRL+E AP H+ VPSGS++RLDYSE PPILAVRLQELFGLADTPRIA GRQ
Sbjct: 721 RNLLPWPLPQRLEEQAPAHLAVPSGSNIRLDYSETPPILAVRLQELFGLADTPRIANGRQ 780

Query: 775 VVKLHLLSPARRPVQVTQDLANFWRSTYAEVKKDLKGRYPKHYWPDDPLVAEATARIKPR 834
            VKLHLLSPARRPVQVTQDLA+FWR+TYAEVKKDLKGRYPKHYWPDDPLVAEATAR KPR
Sbjct: 781 QVKLHLLSPARRPVQVTQDLASFWRTTYAEVKKDLKGRYPKHYWPDDPLVAEATARAKPR 840

Query: 835 KS 836
            S
Sbjct: 841 GS 842