Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase HrpB from Pseudomonas fluorescens SBW25

Subject, 869 a.a., ATP-dependent helicase HrpB from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  678 bits (1750), Expect = 0.0
 Identities = 374/835 (44%), Positives = 533/835 (63%), Gaps = 24/835 (2%)

Query: 3   SLPIDDVLPALRDALAIRHEAVLEAPPGAGKTTRVPLALLNEPWLTGQTILMLEPRRLAA 62
           +LP+ +++P ++  L   H  +L APPGAGK+T VPLAL+ E WL G+ ILMLEPRRLAA
Sbjct: 52  NLPVLEIIPQVKQQLERNHTLILHAPPGAGKSTVVPLALMEETWLKGKKILMLEPRRLAA 111

Query: 63  RAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDGVGLLI 122
           ++ A R+AS L + VG  VGYRIR +SK   +T+IEV+TEGI+TR +  D AL+ VGL+I
Sbjct: 112 KSIATRMASLLKQPVGHQVGYRIRFESKATEDTQIEVLTEGIMTRMIHHDNALEEVGLVI 171

Query: 123 FDEFHERSLDADLALALSLNGRELFRDEQPLKILLMSATLEGERLASLLDDAPILRSEGR 182
           FDEFHER++ AD+A+AL    +++ R +  LKI++MSATL+  +L+ LL  API+ S GR
Sbjct: 172 FDEFHERNIHADVAMALCREVQQILRPD--LKIMVMSATLDMPQLSDLL-QAPIVESHGR 228

Query: 183 MFPVQMRWGRPYQPGEFIEPRVVQTILEALHDETGSVLVFLPGQAEIRRVSQQLADALGD 242
            +PV++   +   P   +  ++ QTI +A  +  G +L FLPGQ EIR+  + L   L  
Sbjct: 229 QYPVEVIHTQDANPWA-LPAQMAQTIKQASQERAGDILAFLPGQGEIRKTLELLQPML-- 285

Query: 243 RTDVLLCPLHGELDLNAQRAAIDPAPAGKRKVVLATNIAETSLTINGVRVVIDAGLARVP 302
             +V + PL+G+L    Q+ AI P P GKRKVVLAT+IAETSLTI G+ +V+D+G +R  
Sbjct: 286 -PEVKVLPLYGQLSPQKQQQAILPHPEGKRKVVLATSIAETSLTIEGIGIVVDSGFSRTS 344

Query: 303 RFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEDQHEGLAAYGSAEILAAD 362
           RFDP SG+++L+T +I++ +A QRAGRAGRL PG CYRLW++   + L  +   E++ AD
Sbjct: 345 RFDPKSGLSKLETVKITKDAAAQRAGRAGRLGPGTCYRLWTKATDDRLLPFRIPEMMEAD 404

Query: 363 LAGLALQLARWGVTP-AQLVWLDVPPTAAYAQAQDLLQRLGALNDD-TLTAHGQKMAELP 420
           LA L L L +WG+     + WL  PP  A +QAQ+LL+ LGA+ +D  LT HG+ +  LP
Sbjct: 405 LASLCLDLVQWGIKDIPHMTWLTPPPAGALSQAQELLEHLGAITEDQKLTPHGEALRNLP 464

Query: 421 AHPRIAHLLLRGQDLGLAATACDVAALLGERDILRG-GGADLHSRLALLSGEERARGSQG 479
            HPRIAH+L++ ++ G  A A D+AA+L E+D L    G D++ R+  L           
Sbjct: 465 CHPRIAHMLIKAEEDGNLALATDIAAILEEKDPLPAQTGVDINLRVEKLRRHRGINKQGK 524

Query: 480 GVQRAKQLARQYRGYLRGQAAQPVADPDHPRWLGALLALAYPDRVAQQRRPGGAEYRLAN 539
           G  R +++A  YR   R   A     P  P   G +L  AYP+R+A  R    A++++ N
Sbjct: 525 GFDRLEKVAGNYR---RLFGAAEENGPFDPYESGLILTYAYPERIAHARPGNNAQFKMTN 581

Query: 540 GRAAVFAEADSLMKQPWLVIADLGSRQGQREERIYLAADFDPMLFDTVLAEQVCNVDQLD 599
           G+ A     D L  + WL IA + +R G    +I++AA  +P      LA  V  ++ +D
Sbjct: 582 GKIASMHHKDDLAHEAWLSIAHVDARDGM--GKIFMAAPLNP----KDLASLVKEIEMVD 635

Query: 600 WDEREGVLRAERQRKVGELVLSREPLTGLDESARSQALVNLVRRKGLELLPWTPELRQWQ 659
           WD + G L AE+Q KVG +VL  +PLT +  + +++A++  +++ G  LL +   ++QWQ
Sbjct: 636 WDLKNGTLVAEKQWKVGHIVLQSKPLTSISNNLKTKAIIKAIQQDGDRLLDFNENVQQWQ 695

Query: 660 ARVMLLRQLDAGKTSEWPDISDKALLASLEHWLMPYLGKVSRLSHFASLDISSFLHNLLP 719
            R+M LR+  A    EWPDIS  ALLA    WL PYL  ++       L++   L   L 
Sbjct: 696 NRIMSLRKWKA--PGEWPDISTAALLAD-PSWLGPYLDSIASADGLKKLNLLEILQYSLD 752

Query: 720 WPLPQRLDELAPQHVKVPSGSSVRLDYSE--QPPILAVRLQELFGLADTPRIAGGRQVVK 777
           +     L++LAP  ++VPSGS+++L YS   +PP+L+VRLQELFGL DTP I  G+Q V 
Sbjct: 753 YDQQHLLEKLAPTRLEVPSGSNIKLQYSADGEPPVLSVRLQELFGLLDTPTINDGKQGVL 812

Query: 778 LHLLSPARRPVQVTQDLANFWRSTYAEVKKDLKGRYPKHYWPDDPLVAEATARIK 832
           +HLLSP  +PVQVT+DL +FW +TY EVKK+LK RYPKHYWP+DP  AEA   +K
Sbjct: 813 IHLLSPGFKPVQVTKDLRSFWENTYFEVKKELKRRYPKHYWPEDPFKAEAVRGVK 867