Pairwise Alignments

Query, 203 a.a., 3'-5' exonuclease from Pseudomonas fluorescens SBW25

Subject, 246 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)

Query: 3   RIAVIDFETTGITP-NSHCRATEI----AVVILERGQIVDRYQSLMNAGVRVPGFIEQLT 57
           R  V+D ETTG+    +H    +I    AV ++ R    + +   +     V      + 
Sbjct: 10  RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVH 69

Query: 58  GISNAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDYELGLIRR-----TRLQK 112
           GI++  L   P    V++E  +++    L+ HNA+FD  F DYE GL++R         K
Sbjct: 70  GIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFCK 129

Query: 113 FACSLLLARRLMPTAPNHKLGTLNAFAQLPHTGKA-HRAMADAEMAANL 160
              SL LAR++ P   N  L  L +  ++ ++ +  H A+ DA++ A +
Sbjct: 130 VTDSLALARKMFPGKRN-SLDALCSRYEIDNSKRTLHGALLDAQILAEV 177