Pairwise Alignments

Query, 1149 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas fluorescens SBW25

Subject, 1160 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit from Pseudomonas putida KT2440

 Score = 1754 bits (4542), Expect = 0.0
 Identities = 865/1153 (75%), Positives = 967/1153 (83%), Gaps = 10/1153 (0%)

Query: 1    MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE 60
            M +   L  GFM+VHGNRLD+LRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
Sbjct: 1    MLNTAHLHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE 60

Query: 61   DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL 120
            DP +DD GGCGIAAAIDVQLPGSFMWQLYR VLGR EIP  SLLDKAPLTWRLMRLLP L
Sbjct: 61   DPLEDDQGGCGIAAAIDVQLPGSFMWQLYRSVLGRSEIPEVSLLDKAPLTWRLMRLLPAL 120

Query: 121  IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE 180
            I++PHFEPL+RFLT D+DLRKRYQLAERLADLFDQYQVYRADWL+DWA G H +   RGE
Sbjct: 121  IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWATGEHVINTARGE 180

Query: 181  SKPLNLANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLEHAPPGLPSRVIVFG 240
             K L   N WQAELWRALL DVGE+GMA+SRAGVHQRFIERIN+LE AP GLP RVIVFG
Sbjct: 181  RKVLPPGNRWQAELWRALLEDVGEQGMAQSRAGVHQRFIERINSLEQAPAGLPPRVIVFG 240

Query: 241  ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKSGMPVTI 300
            ISSLPAQALEALAGL+RFSQVLLCVHNPCRHHW+DIVADKDLLR++YKRQ RK GMP+ +
Sbjct: 241  ISSLPAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQL 300

Query: 301  DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL 360
            D QTLHQHAHPLLAAWGKQGRDYI+LLDSYDDP SY+  F DGRIDLFSD  PTTLLN+L
Sbjct: 301  DDQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDGSPTTLLNEL 360

Query: 361  QDDILELRPLNETRELWPAVDLDRDTSIRFHIAHSAQREVEILHDQLLQRFSADPALRPR 420
            QDDILELRPL E+RE WPAVD  +D SIRFHIAHS QREVEILHDQLL RFSADP LRPR
Sbjct: 361  QDDILELRPLAESRERWPAVDTTKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPR 420

Query: 421  DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR 480
            D+IVM+PD+D+YAPHIRAVFGQL+RNDPR+IPFTLTDQGQRGR+PLLIA+EHLLKLPDSR
Sbjct: 421  DVIVMLPDIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSR 480

Query: 481  FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPTELEQNS 540
            F VSE+LDLLDVPA+R RF I+E DLPTLHRWIEGAGIRWGL+A QRA LGLP  LEQNS
Sbjct: 481  FAVSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLDAAQRASLGLPAGLEQNS 540

Query: 541  WRFGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALNDAHQALSQPAPP 600
            WRFGLRRMLLGYAVG G ACDGIEPYDEIGGLDAALIGPLVALLDAL  A QALS+PA  
Sbjct: 541  WRFGLRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVACQALSEPATV 600

Query: 601  RVWGERLQRLMQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA 660
              WGERL  L+ +FFL   E D++LL QL+ LR++WLE CE+VGL D LPLTVVREAWL+
Sbjct: 601  SQWGERLHALLHVFFLAEDEGDEFLLMQLQDLRDSWLEVCETVGLHDPLPLTVVREAWLS 660

Query: 661  GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP 720
            GLDQG+LSQRFLAG+VNFCTLMPMRAIPF++VCLLGMNDGDYPRAQPPLDFDLM SDYRP
Sbjct: 661  GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRP 720

Query: 721  GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQLRDHLASGWHHAN 780
            GDRSRREDDRYLLLEALLSARDQLY+SWVGRSIRDNS+RPASVLIGQLRDH+A+GWH A+
Sbjct: 721  GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHIAAGWHLAD 780

Query: 781  SD--------EPLIDAMTQEHPLQPFSARYFHEGDALFSYAREWQLLHEASDA-LPTEHD 831
            +         E L+ A+TQEHPLQPFS RYF +G  LFSYA EWQ+LH+  +    +E  
Sbjct: 781  AQQGQPARPGEQLLHALTQEHPLQPFSPRYFQKGSPLFSYAHEWQVLHQQGETDAQSEPG 840

Query: 832  LAPHQQEEPLSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSD 891
            L P+Q  E LSL QL DFLR+PV+HFFSQRLKV+FEA E P  DEEPFVLD LQRY  S+
Sbjct: 841  LPPYQDAEALSLHQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFVLDTLQRYGASE 900

Query: 892  SLLSAALTQPDHLDQALNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLAL 951
            SLL AAL +PD+ +QAL AQA RLQ  GLLP+ GFGE L+NELIEPLPDLL+R+QQLL  
Sbjct: 901  SLLGAALAEPDNAEQALRAQARRLQACGLLPLAGFGELLQNELIEPLPDLLQRHQQLLQR 960

Query: 952  WPTPHPGAEPVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTR-KWHRLIRP 1010
            WP    GA PV FEH   +LEGW+  + +  D  LLS+TT+PN+I + +   KWHRLI P
Sbjct: 961  WPQLVEGALPVHFEHGQHRLEGWLGRVFQAEDQSLLSITTVPNTISAGRNNLKWHRLIAP 1020

Query: 1011 WVNHVVACACGLPLSTGLVASDDTLLLPPLDTSNAREILCNLLLAWHTGMSKPLPVAVKT 1070
            WV H+ ACA G P ++ LVASD TLLL PL  + A ++L +LL+A    M+ PLPVA KT
Sbjct: 1021 WVTHLAACAAGYPYNSALVASDLTLLLAPLPQAQAAQLLGDLLVARQAAMNAPLPVAAKT 1080

Query: 1071 AFAWLSQTDPVKAEAAASKTYEGDGLTNHGERRETPALTRRFPDYATLIASEEFEGWCET 1130
            AFAWL+Q D  KA AAA++ YEGD  T+ GER E+ AL R+F D+A L A E FEGWCET
Sbjct: 1081 AFAWLAQDDADKALAAAARAYEGDERTSFGERSESIALARQFRDFAALTADETFEGWCET 1140

Query: 1131 LYRPLLNAPWRSL 1143
            LYRPL  APW++L
Sbjct: 1141 LYRPLFTAPWQTL 1153