Pairwise Alignments

Query, 1149 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas fluorescens SBW25

Subject, 1123 a.a., Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  663 bits (1711), Expect = 0.0
 Identities = 439/1100 (39%), Positives = 597/1100 (54%), Gaps = 94/1100 (8%)

Query: 13   VVHGNRLDELRSLVVSWMRRYPLA-PLENEIALVQSNGIAQWLKLALAEDPEDDDMGGCG 71
            V H NRLD L +L+   + R  L  P E E+ LVQS G+AQWL++ L++          G
Sbjct: 4    VYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--------FG 55

Query: 72   IAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPELIDQPHFEPLQR 131
            IAA I   LP SF+W+++  VL   +IP +S   K  ++W+LM LLP+L+D+  F  L+ 
Sbjct: 56   IAANIAFPLPASFIWEMFVRVL--PDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRH 113

Query: 132  FLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNLANCWQ 191
            +LT DTD RK +QL+ R ADLFDQY VYR DWL  W AG+     G GE      A  WQ
Sbjct: 114  YLTDDTDKRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTV--EGLGE------AQNWQ 165

Query: 192  AELWRALLLDVGEEGMAE-SRAGVHQRFIERINTLEHAPPGLPSRVIVFGISSLPAQALE 250
            A LW+AL+      G     RA ++QRFI+ + +    PPGLPSRV + GIS+LP   L 
Sbjct: 166  APLWKALVEYTAALGQPRWHRANLYQRFIQTLESATACPPGLPSRVFICGISALPPVYLR 225

Query: 251  ALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKS----GMPV---TIDPQ 303
            AL  L +  ++ L   NPCR++W DI  D   L     RQ R S     +P+     +P+
Sbjct: 226  ALQALGKHIEIHLLFTNPCRYYWGDI-KDPAWLAKLMARQRRHSFEDRHLPLFRENQNPE 284

Query: 304  TLHQH------AHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLL 357
             L          +PLLA+WGK GRDYI LL   ++            +D F D  P  LL
Sbjct: 285  ALFNSDGEQDIGNPLLASWGKLGRDYIYLLSELENSQE---------LDAFVDITPDNLL 335

Query: 358  NQLQDDILELRP---LNETRELWPAVDLDR-----DTSIRFHIAHSAQREVEILHDQLLQ 409
            +++Q DILEL          E +   D  R     D S+ FH+ HS QREVEILHD+LL 
Sbjct: 336  HRIQADILELESHAVAGVNLEEYSRSDNKRLLDPEDNSLSFHVCHSPQREVEILHDRLLA 395

Query: 410  RFSADPALRPRDIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIA 469
               ADP L PRDIIVMV D+DSY+P I+AVFG       R++P+ ++D+  R   P+L A
Sbjct: 396  MLEADPTLTPRDIIVMVADIDSYSPFIQAVFGSAPTE--RYLPYAISDRRARQSHPVLQA 453

Query: 470  VEHLLKLPDSRFPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAG 529
               LL LPDSRF   ++L LLDVP L  RF I E  L  L  W+  +GIRWG++ +    
Sbjct: 454  FISLLSLPDSRFVSEDVLALLDVPVLAARFTINEEGLRYLRLWVNESGIRWGIDDDNVRE 513

Query: 530  LGLPTELEQNSWRFGLRRMLLGYAVGTGAA-CDGIEPYDEIGGLDAALIGPLVALLDALN 588
            L LP    Q++W+FGL RMLLGYA+ +       + PYDE  GL A L+G L +LL  LN
Sbjct: 514  LELPAT-GQHTWQFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572

Query: 589  DAHQALSQPAPPRVWGERLQRLMQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDE 648
               + L+Q  P   W    + +   FFLP ++  +  +  +EQ  +  +    +    D 
Sbjct: 573  IWRRGLAQERPLEEWLPVCRDMFNDFFLPDAD-TEAAMTLIEQQWQAIIAEGVAAEYGDA 631

Query: 649  LPLTVVREAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPP 708
            +P++++R+     LDQ R+SQRFLAG +N CTLMPMR+IPF++VCLLGMNDG YPR   P
Sbjct: 632  VPISLLRDELAQRLDQERISQRFLAGPINICTLMPMRSIPFRVVCLLGMNDGVYPRQLAP 691

Query: 709  LDFDLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQL 768
            L FDLM      GDRSRR+DDRYL LEAL+SA+  LYIS++GRSI+DNS+R  SVL+ +L
Sbjct: 692  LGFDLMSQKPMRGDRSRRDDDRYLFLEALISAQQTLYISYIGRSIQDNSERFPSVLVQEL 751

Query: 769  RDHLASGWHHANSDEPLI---------DAMTQEHPLQPFSARYFHEGDALFSYAREWQLL 819
             D++    H+   DE L            +T+ H   PF A+ +  G+   SYAREW  L
Sbjct: 752  VDYIGQS-HYLPGDETLTCDESEARVKAHITRLHTRMPFDAQNYQPGEQQ-SYAREW--L 807

Query: 820  HEASDALPTEHDLA---PHQQEEPLSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADE 876
              AS +     D     P    E L+L  LQ F  +PV+ FF  RL+V F + E  + D 
Sbjct: 808  PAASQSGKAHSDFVQPLPFTMPETLTLESLQRFWAHPVRAFFQMRLQVNFRSEESEIPDA 867

Query: 877  EPFVLDALQRYSLSDSLLSAALTQPDHLDQALNAQALRLQGSGLLPMVGFGECLRNELIE 936
            EPF L+ L RY L+  LL+  L + D  ++       R + +G LP   FGE   +   +
Sbjct: 868  EPFELEGLTRYQLNQQLLN-TLVEEDDAERLFR----RFRAAGELPYGAFGEIFWDAQCQ 922

Query: 937  PLPDLLRRYQQLLALWPTPHPGAEPVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSI 996
             +  L  R    +     P    E V    +GVQL GW   L +  + GLL       S+
Sbjct: 923  EMQQLASR----VIACRKPSQSLE-VDLLCNGVQLTGW---LPQVQEDGLLRWRPALISV 974

Query: 997  GSIKTRKWHRLIRPWVNHVVACACGLPLSTGL-VASDDTLLLPPLDTSNAREILCNLLLA 1055
                     + ++ W+ H+V CA G    + L +  +     PPLD + A   L  L+  
Sbjct: 975  A--------QGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKTQAMAYLAQLIEG 1026

Query: 1056 WHTGMSKPLPVAVKTAFAWL 1075
            +  GMS PL V  ++  AW+
Sbjct: 1027 YREGMSSPLLVLPESGGAWI 1046