Pairwise Alignments

Query, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens SBW25

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 113/522 (21%), Positives = 203/522 (38%), Gaps = 81/522 (15%)

Query: 330 DAAVLQHAAGWVGKRFEDEKRRRAEMGFDDMLIRLNAALQADGGERLASVIREQFPVALI 389
           D A ++   G + + ++    + + M FDD+L   N   +      + +  +++F   L+
Sbjct: 166 DEAAMKPRMGEIYRAYQKRLFKSSAMDFDDLLFNTNVLFRDHPD--VLNKYQQRFRYVLV 223

Query: 390 DEFQDTDPVQYSIFDSIYRIEENHLDSGLFLIGDPKQAIYAFRGADIYTYLRARQSTTGR 449
           DEFQDT+  QY I   +  + +N     + ++GD  Q+IYAFRGADI   L   +     
Sbjct: 224 DEFQDTNLSQYLITKKLAAVHQN-----ICVVGDDAQSIYAFRGADIQNILNFEKDYPDL 278

Query: 450 HHT-LGTNFRSSHAMVEAVNHVFQRAETGRGAFLFREPNGENPVPFHSVLSQGRKEQLQV 508
           H   L  N+RS+  +VEA N + ++ +      ++ + NG   +    + S    E+   
Sbjct: 279 HVVKLEQNYRSTKNIVEAANSIIEKNKAQLKKNVWTQ-NGNGDL-IELIKSASDNEE--- 333

Query: 509 NGQTLPAMNLWHLPTDQPVSNA----VYRQQLAAACATHIVELLNGGQQ---GTAGFLRP 561
               + A  ++    ++ + N+    +YR    +      +  +N   +   G + + R 
Sbjct: 334 --GRMVASTIFEEKNNKKLQNSDFAILYRTNSQSRALEEALRKMNISYKIVGGLSFYQRK 391

Query: 562 DVSFTGVLPSDIAILVRDGKEAQAVRTELAARGVRSVYLSDKDSVFAAQEAHDLLAWLKA 621
           ++    ++     ++ +D +EA         RG+    LS  + +  A   HD+  W   
Sbjct: 392 EIK--DLMAYFRYVVNQDDEEAFKRIINYPKRGIG---LSSVEKMMVAAYEHDIPLWQVV 446

Query: 622 CAEPDV--ERPLRAALACVTLNLSLP-ELERLNQDELAWESRVMQFRGYRAIWRTQGVLP 678
                    R   +     T+  S   E+ER +  E A  S + +  G            
Sbjct: 447 TNSSSFLSGRASNSVSDFATMIKSFQMEVERKDAYEAA--STIAKQSG------------ 492

Query: 679 MLRRLLHDFKLPQTLIARSDGERVLTNLLHLSELLQQAASELDGEQALIRHLAEHLALSG 738
           +LR L  D  +        +G     N+  L   +++     + E   +    + +AL  
Sbjct: 493 LLRELYEDKTI--------EGLNRYENVQELLNAIKEYVDNPENEDKNLGAFLQEIALLT 544

Query: 739 QAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLPFICSAKPVDGSRLPLHYHDEHGKS 798
               +     + +   V ++TIH SKGLE+  VF         V G    L         
Sbjct: 545 DNDRD-----KDEMDAVTLMTIHSSKGLEFRQVF---------VVGLEEDLF-------- 582

Query: 799 HVSLRPTPELIAQADNERLAEDLRLLYVALTRAKHACWLGIA 840
                  P  +     E L E+ RL YVA TRA    +L  A
Sbjct: 583 -------PSQMMMQSREDLEEERRLFYVATTRAMEKLYLSYA 617



 Score = 35.0 bits (79), Expect = 2e-05
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 13 KGSQLIEASAGTGKTFTISALYLRLVLGHGGDEAGFGRELLPPQILVVTFTDAATKELRE 72
          +G  +I A AG+GKT  ++     L+     D         P QIL +TFT+ A  E+R 
Sbjct: 19 EGPLMIIAGAGSGKTRVLTFRIAHLIRAKNVD---------PFQILALTFTNKAASEMRN 69

Query: 73 RIRIRLAEAAR 83
          RI   +   AR
Sbjct: 70 RIERLIGLEAR 80