Pairwise Alignments

Query, 701 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas fluorescens SBW25

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  432 bits (1111), Expect = e-125
 Identities = 296/663 (44%), Positives = 386/663 (58%), Gaps = 75/663 (11%)

Query: 22  QLLERWVDRGWLRALDKAFVGFLHELDPHADPLVLLAAALTSHQLGHGHVCLDLFETLKA 81
           +LLE  V++  LR +D  F   +   D   DP V LAAAL SH  G GHVCL L      
Sbjct: 6   RLLEA-VEQKLLRPIDAQFALTVAGND---DPAVTLAAALLSHDAGEGHVCLPLSR---- 57

Query: 82  PDFALSLPPEGDLQTGAMLLPSQLLEGLDGAHWCHALAASHLVALAVDGSESAQSRPLVL 141
               L+L  E        LL + + E      W   L AS  V+    G   A   PL+L
Sbjct: 58  ----LTLTEEAH-----PLLVACISETATPIDWKKRLLASAAVSC---GDSPA---PLIL 102

Query: 142 SGKRLYLRRYWTYERRIDTALRLRLATQERVAAD---LPQRLDSLFDQPPPDGVIDWQKL 198
            G+RLYL R W  ER   T  R      + +A D   L + LD+LF   PP   ++WQK+
Sbjct: 103 CGERLYLNRMWCNER---TVARFFNEVNQAIAVDEDQLSRILDALF---PPTDEVNWQKV 156

Query: 199 ACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPSVESGSPLRIRLAAPTGKAAARLTE 258
           A A+A     S+++GGPGTGKTTTV +LLA L    +  G   RIRLAAPTGKAAARLTE
Sbjct: 157 AAAVALTRRISVISGGPGTGKTTTVAKLLAALI--QMADGERCRIRLAAPTGKAAARLTE 214

Query: 259 SISQQVLSLKVPDNVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLVVDEASMI 318
           S+   +  L + D  K++IP   +T+HRLLG++PG++  RHH GNPL LDVLVVDEASMI
Sbjct: 215 SLGAALRQLPLTDAQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMI 274

Query: 319 DLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGFYSAETRRWLQAVS 378
           DL MM+ L+D+LPPH R++ LGD+DQLASVEAGAVLGD+C    AGF +AE  R L  ++
Sbjct: 275 DLPMMSRLIDSLPPHGRVIFLGDRDQLASVEAGAVLGDICAYVNAGF-TAERARQLSRLT 333

Query: 379 GEDLSA-SGLQEDLDGTHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNAEEARKLLAA 437
           G  + A +G Q        L   + +L+ S RFG  SGIG+LA  +N  +   A + +  
Sbjct: 334 GSAIPAGAGTQ-----AASLRDSLCLLQKSYRFGSDSGIGKLAAAINCGD-RSAIQAVFQ 387

Query: 438 RSHDDLFCVSLKGEHDYALERLVLDGQGDGAEGYRYYLNLL-QSARPSADTPREDTAWTH 496
           +   D+   +L+   DYA    +LD   +   GY  YL LL + A P A           
Sbjct: 388 QGFSDIEKRTLQSSDDYA---GMLD---EALAGYGRYLRLLHEKATPEA----------- 430

Query: 497 WAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIE--GDEQWYEGRPVLMTR 554
               +LQAF+ +QLLCA+R+GP+GV GLN RI  A+ + R I+     +WYEGRPV++ R
Sbjct: 431 ----ILQAFNEYQLLCALREGPFGVRGLNDRIEQAMVQQRKIQRHPHSRWYEGRPVMIAR 486

Query: 555 NDYGLGLMNGDIGIALKLPESDGGPPVLRVAFPRNDGQGGVRFVLPSRLNDVETVYAMTV 614
           ND  LGL NGDIGIAL   +       LRV F   DG   ++ V PSRL + +T +AMTV
Sbjct: 487 NDSALGLFNGDIGIALDRGQG------LRVWFVMPDGT--IKSVQPSRLPEHDTTWAMTV 538

Query: 615 HKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRRKVKRL 674
           HKSQGSEF H ALILP   +PV+T+EL+YT +TRA+R  SL      +   A+  + +R 
Sbjct: 539 HKSQGSEFDHAALILPSQRSPVVTRELVYTAVTRARRRLSLYADE-RILAGAIVTRTERR 597

Query: 675 SGL 677
           SGL
Sbjct: 598 SGL 600