Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  303 bits (777), Expect = 1e-86
 Identities = 184/463 (39%), Positives = 274/463 (59%), Gaps = 26/463 (5%)

Query: 195 DTEARAAAQIEKAISGLKGLSAVFGASEQSALTALETALGAYRTAVQNYKAANANIVTAR 254
           + E R    ++K  +     +A+    E++AL         +   + NY  A A+++   
Sbjct: 83  EAETRIGVLVDKVKTAQASYAALPAGPEEAALYK------TFMVTLDNYLKAQADMLALS 136

Query: 255 AEMTTQ------GADIVTISDKLYE-----IQLNRRDAESAQARSLQ---------LIST 294
            +           + I   +D++ E     I +N  DA++A   + Q         +  +
Sbjct: 137 KQGKVDEMRALINSRIKDGTDQMGEQLNKLIAINVADAKTADTDAGQSYDGAITGVIAVS 196

Query: 295 LLALLVGVIAAWVITRQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQGIQRMG 354
           + A L+ V+ AW++TR I  P+++ + V E IA G+LS  I+   +DE   L   +  M 
Sbjct: 197 VAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDDGKDEPARLLGALATMQ 256

Query: 355 TTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEVA 414
             LR+ I  I    TQ+ASAAEELSAVTE+ S G+  Q  E DQ ATA++EMTA V+EVA
Sbjct: 257 ANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNEMTAAVEEVA 316

Query: 415 RNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVMD 474
           RNA   S A++ ++  AR G   V E +  I+ +  +V  +   +  L  +   IG V+D
Sbjct: 317 RNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQGRDIGKVLD 376

Query: 475 VIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQN 534
           VI+A+AEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RT +ST+EIE +VAG+QN
Sbjct: 377 VIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQN 436

Query: 535 GTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEE 594
           GT +    M  S   T +++E+ R AGV+LE IT+++S I   N  IA+A+E+Q+ V+ E
Sbjct: 437 GTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERNLVIASASEEQAQVSRE 496

Query: 595 ISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHF 637
           + R++VN+RD++ Q+A  +++T+ +S EL+RL   L  MV+ F
Sbjct: 497 VDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539