Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

Subject, 655 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  399 bits (1024), Expect = e-115
 Identities = 253/650 (38%), Positives = 390/650 (60%), Gaps = 18/650 (2%)

Query: 5   FGNISVNLKLGLGFGLVLVLTSILALTGWTSLGGLIDRSNWMSDITQLNASLTKLRIVRL 64
           F N+ +  KLGLGF LVL+LT+++A  G  SL  +  R   +  ++ LN+ L K+R++  
Sbjct: 9   FANLGMAKKLGLGFTLVLLLTALIAAIGVWSLQTIGQRFEGLKAMSSLNSGLLKVRLIEQ 68

Query: 65  QYMLANGDEAVAQNVQTSLDAFAAQQQKLLDSFKSPENLKLLNEQKGVITAYQQSLNKMR 124
            Y L + D      +  S+DA AA    L    +S  N+ ++ + +  + AY+++ ++  
Sbjct: 69  DYAL-HADPKAVDALHESVDALAALAASL--KAQSAANVPVMTDVEEALAAYRKAFDEFV 125

Query: 125 EAYRNGNASRQV-------MGDKADIANAQIE---ALDTKVQQMPESPERFSQFQAVTRA 174
           E  +  + + ++       + +  D+  A +    A   K  Q  E  E   Q   V++ 
Sbjct: 126 ELTQTKDLALEMASWSVSSVANNLDVLQAGLADDGAYGLKESQGKEGAEFIEQAGQVSQV 185

Query: 175 KEEFMLARYEVRGYI---ANVSPDT-EARAAAQIEKAISGLKGL-SAVFGASEQSALTAL 229
               + A  E    +     V  DT E     Q ++A++ ++ L ++V  +  Q+ L  +
Sbjct: 186 SRLMLQAMNEAHVRLNQSRKVDEDTSEQGKIEQADQALAQVEQLKTSVKDSGYQTVLNEV 245

Query: 230 ETALGAYRTAVQNYKAANANIVTARAEMTTQGADIVTISDKLYEIQLNRRDAESAQARSL 289
              + A+   +  Y    A       ++  +   +V+  ++ Y  +     A+  ++  L
Sbjct: 246 AGHIAAFSEKLGEYTGLLAQEKVVYKQLHDRADQVVSRVNQAYGAEDQSMQAQLKKSSML 305

Query: 290 QLISTLLALLVGVIAAWVITRQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQG 349
            L S+ LALLVG+IAAWVITR I  P++  +AV ++IA+GDLS  ++V RRDE+G L Q 
Sbjct: 306 ILGSSALALLVGLIAAWVITRLIVAPLRSVIAVAQQIAAGDLSGRMEVNRRDEIGQLMQA 365

Query: 350 IQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTAT 409
           +Q+MG  L +++SG++ G+ Q+AS+A  LS+VTEQT+  V+SQK ET+QVATAM++MTAT
Sbjct: 366 MQQMGNGLSQMVSGLQAGIEQLASSAHSLSSVTEQTNVEVSSQKEETEQVATAMNQMTAT 425

Query: 410 VQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKI 469
           V +VARNAE+A+ AA  AD +  +G +VV +++ +IE LA   + ++ ++  L  E   I
Sbjct: 426 VHDVARNAEEAAQAAQTADEKVDSGQRVVRQSLQRIELLATSSSSASASIESLSAEIQHI 485

Query: 470 GSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLV 529
           GSV+ VIK+VAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ STEEIE LV
Sbjct: 486 GSVLSVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTQHSTEEIERLV 545

Query: 530 AGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQS 589
           + L++  Q     +  S  L   +V    +   +L +I   VS IQ MNQQIAAAAE+QS
Sbjct: 546 STLRSAAQSSVQQIQQSGELVKLAVSDALETESALGSIAVAVSLIQQMNQQIAAAAEEQS 605

Query: 590 AVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFRV 639
           +VAEEI+RS+ ++R  ++Q+A +    A SS++LA+LG++L+ MV HFR+
Sbjct: 606 SVAEEINRSVTSIRASADQSALSMQGNAASSIQLAQLGAELKGMVGHFRL 655