Pairwise Alignments

Query, 300 a.a., DMT family transporter from Pseudomonas fluorescens SBW25

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 20/294 (6%)

Query: 4   SLYLLTVL-IWGTTWIALKWQLGVVAIPVSIVYRFGLAA---LVLFALLLLSRKLQVMNR 59
           +LYLL +  IWG +++ ++     +    +  +R  +AA   LV+ A++ +S   Q   R
Sbjct: 6   TLYLLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDFQGKFR 65

Query: 60  RGHLICVAQGLCLFCVNFMCFLTASQWIPSGLVAVVFSTATLWNALNARVFFGQRVARNV 119
              L+    G+    +    +  A+Q +P+G  A+  +T  L   L   +FF +R+  + 
Sbjct: 66  TVLLL----GVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSK 121

Query: 120 LMGGGLGLAGLGLLFWPEVVGHTASPQTLLGLGLALLGTMCFSAGNMLSS--LQQKAGLR 177
           + G  LGL G+G+L     V      + L G    LL T C+     L+   L Q+ GL 
Sbjct: 122 IAGVCLGLFGVGVLTRAGPVAFDL--ELLTGALACLLATTCYGFAGFLARRWLDQRGGL- 178

Query: 178 PLTTNAWGMAYGAAMLA----TYCAVRGIPFEMDWSARYV-GALWYLVIPGSVIGFTAYL 232
               +A G   GA +       Y A+   P    W    V G+L  L +  +   +  Y 
Sbjct: 179 DSRLSALGSMLGATLFLLPFFAYSAISQPP--ASWGGWQVWGSLLGLGLVCTAFAYILYF 236

Query: 233 TLVGRMGPERAAYCTVLFPVVALNVSAFAEGYQWTAPALAGLVLVMVGNVLVFR 286
            L+  +GP ++   T + P   +   A   G   +   + G VL+     LV R
Sbjct: 237 RLLTSIGPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVYGGVLIGGALWLVLR 290