Pairwise Alignments

Query, 569 a.a., single-stranded-DNA-specific exonuclease RecJ from Pseudomonas fluorescens SBW25

Subject, 569 a.a., ssDNA exonuclease RecJ from Pseudomonas simiae WCS417

 Score = 1102 bits (2851), Expect = 0.0
 Identities = 558/569 (98%), Positives = 564/569 (99%)

Query: 1   MRIDPRPLPAVLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQRLKGIDAAVDLL 60
           MRIDPRPLPAVLPFLG+LPPLLTRLYAARGVQSEAELDKSLARLIPYQ+LKGIDAAVDLL
Sbjct: 1   MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL 60

Query: 61  VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV 120
           VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
Sbjct: 61  VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV 120

Query: 121 ALQREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGDELPAADAIVNPNQPGCEF 180
           ALQR PQLLITVDNGISSVEGVAAAKAAGL+VLVTDHHLPGDELPAADAIVNPNQPGCEF
Sbjct: 121 ALQRAPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF 180

Query: 181 PSKALAGVGVIFYVLMALRARLRSLGWYEHKPQPNIGELLDLVALGSVADVVPLDANNRI 240
           PSKALAGVGVIFYVLMALRARLRSLGWY++ PQPNIGELLDLVALGSVADVVPLDANNRI
Sbjct: 181 PSKALAGVGVIFYVLMALRARLRSLGWYDNTPQPNIGELLDLVALGSVADVVPLDANNRI 240

Query: 241 LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC 300
           LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
Sbjct: 241 LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC 300

Query: 301 LLTTDVAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG 360
           LLTTD AAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG
Sbjct: 301 LLTTDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG 360

Query: 361 VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALAVVASQHPHLIAKYGG 420
           VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSV GFHIRDALAVVASQHP+LI KYGG
Sbjct: 361 VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLITKYGG 420

Query: 421 HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA 480
           HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
Sbjct: 421 HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA 480

Query: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR 540
           GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR
Sbjct: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR 540

Query: 541 WVELAYKLDVNEFRGNETVQLMIAHIEPR 569
           WVELAYKLDVNEFRGNETVQLMIAHIEPR
Sbjct: 541 WVELAYKLDVNEFRGNETVQLMIAHIEPR 569