Pairwise Alignments

Query, 569 a.a., single-stranded-DNA-specific exonuclease RecJ from Pseudomonas fluorescens SBW25

Subject, 569 a.a., ssDNA-specific exonuclease RecJ from Pseudomonas putida KT2440

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 507/569 (89%), Positives = 541/569 (95%)

Query: 1   MRIDPRPLPAVLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQRLKGIDAAVDLL 60
           MRI+PRPLP  LPFLG+LPPLLTRLYAARGVQSEAELDKSLARL+PYQ+LKGI+A VDLL
Sbjct: 1   MRIEPRPLPPTLPFLGNLPPLLTRLYAARGVQSEAELDKSLARLLPYQQLKGIEAGVDLL 60

Query: 61  VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV 120
           V A++QRQRILIVGDFDADGATASTVG LGLRLLGAAHVDYLVPNRFEYGYGLTPEIV V
Sbjct: 61  VEAIDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV 120

Query: 121 ALQREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGDELPAADAIVNPNQPGCEF 180
           ALQR+PQLLITVDNGISSV+GVAAAKAAGLKVLVTDHHLPG++LP ADAI+NPNQPGC F
Sbjct: 121 ALQRQPQLLITVDNGISSVDGVAAAKAAGLKVLVTDHHLPGEQLPDADAIINPNQPGCSF 180

Query: 181 PSKALAGVGVIFYVLMALRARLRSLGWYEHKPQPNIGELLDLVALGSVADVVPLDANNRI 240
           PSK+LAGVGVIFYVLMALRARLRSLG YE +PQPNIGELLDLVALGSVADVVPLDANNRI
Sbjct: 181 PSKSLAGVGVIFYVLMALRARLRSLGRYEAQPQPNIGELLDLVALGSVADVVPLDANNRI 240

Query: 241 LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC 300
           LVHQGLERIRAGRARPG+KAILEVA+RD  RITSTDLGFILGPRLNAAGRLDDMSLGIEC
Sbjct: 241 LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC 300

Query: 301 LLTTDVAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG 360
           LL  D A A++MA QLD +NQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFD +WHQG
Sbjct: 301 LLCEDAALAQDMAQQLDDLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG 360

Query: 361 VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALAVVASQHPHLIAKYGG 420
           VIGILASR+KERY RPTIAFADAGDG+LKGS RSVPGFHIRDAL  VA++HP LI+K+GG
Sbjct: 361 VIGILASRLKERYHRPTIAFADAGDGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG 420

Query: 421 HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA 480
           HAMAAGL+LPE NF  FAEAFD EVRRQLREEDLTGRLLSDG+LAVEEFHL+LA+ALRHA
Sbjct: 421 HAMAAGLSLPEANFSAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHA 480

Query: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR 540
           GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSV+LDGIAFG+DREVWPNPTVR
Sbjct: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVR 540

Query: 541 WVELAYKLDVNEFRGNETVQLMIAHIEPR 569
           WVELAYKLDVNEFRGNE+VQLMIAH+EPR
Sbjct: 541 WVELAYKLDVNEFRGNESVQLMIAHMEPR 569