Pairwise Alignments

Query, 708 a.a., DNA helicase RecQ from Pseudomonas fluorescens SBW25

Subject, 637 a.a., ATP-dependent DNA helicase RecQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  614 bits (1583), Expect = e-180
 Identities = 328/621 (52%), Positives = 429/621 (69%), Gaps = 27/621 (4%)

Query: 1   MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRN--- 57
           +LE +  VL ++FGYD+FRG Q  I+  V +GGDALVLMPTGGGKSLC+QVPA++R    
Sbjct: 14  ILENSLGVLHEVFGYDAFRGPQADIVSHVGAGGDALVLMPTGGGKSLCYQVPAIVRERTG 73

Query: 58  -GLAVVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPE 116
            GL VVVSPLIALM DQV  L E GVAAA LNS+LS E  + +  ++ RGE+ +LY APE
Sbjct: 74  QGLTVVVSPLIALMHDQVGALIEAGVAAAFLNSSLSLEDAQQVEKQMLRGELTLLYAAPE 133

Query: 117 RLVQPRMLAFLQSL----EIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIAL 172
           RL  PR LA L SL    +++LFAIDEAHCVSQWGHDFR EY  L  L E +  VPR+AL
Sbjct: 134 RLTTPRFLALLDSLHERGKLSLFAIDEAHCVSQWGHDFRPEYRALVVLHERYAGVPRVAL 193

Query: 173 TATADKRTREEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS---- 228
           TATAD  TR +IVERL LQ A  F+SSFDRPNI Y++V K+    QL  F+ +  +    
Sbjct: 194 TATADDLTRADIVERLQLQEARTFISSFDRPNIRYQLVEKKDATTQLQRFIRDEHTGADG 253

Query: 229 -DAGIVYCLSRKKVDEVAAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIA 287
            DAGIVYC SR++V+EVAA LCE G+ ALPYHAGL    R  HQ RFL EEGLIMVATIA
Sbjct: 254 HDAGIVYCQSRRRVEEVAAMLCEAGFNALPYHAGLDAAVRQRHQDRFLREEGLIMVATIA 313

Query: 288 FGMGIDKSNVRFVAHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNS 347
           FGMGIDK +VRFVAH+D+PK++E YYQETGRAGRDG PA+AWM YGLQDVV  ++M+  S
Sbjct: 314 FGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGEPANAWMAYGLQDVVNQRRMIDES 373

Query: 348 EGDERHKRLEQHKLDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATE 407
              +  K++ + KLDA+L+L E + CRR  LL+YF E   QPCG+CDNC+   +  DATE
Sbjct: 374 PAADEFKQVLRGKLDALLTLAEASDCRRVRLLSYFGE-ASQPCGNCDNCLTPPELHDATE 432

Query: 408 PARQGLSAIYR----TGQRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWR 463
            AR+ LS IYR    +G  +G GH++D+L GK  +KV+ +GHEKLS +G+G   +E +WR
Sbjct: 433 SARKLLSCIYRVQQASGTAFGAGHIMDILRGKATDKVKQYGHEKLSTFGIGADLSETQWR 492

Query: 464 SLFRQMVARGLVDIDIEGYGGLRLNDSCRPLLKGEVSLELRRDL-KPQTTAKSSTSQASQ 522
           +L RQ++AR  V +    Y  L L D+ R +LKG+  + L+    K  ++A+S   +AS+
Sbjct: 493 ALLRQLIAREAVQVHDAPYNTLHLADAARDILKGQSPVWLKSLADKAASSARSGRQRASR 552

Query: 523 LVRGE--------EREQWEALRTLRRKLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMA 574
               +        ERE  EAL+  R  +A+EH++P +VIF D+TL  +   +P ++A++ 
Sbjct: 553 ATAKDDGVPLSLSERECLEALKAWRAGVAREHNLPAFVIFHDATLRAIAGRKPETLADLD 612

Query: 575 RVSGVGARKLERYGQAFLEVL 595
            ++G+G +K E YG   L+V+
Sbjct: 613 GIAGIGQKKREAYGSDVLQVV 633