Pairwise Alignments

Query, 708 a.a., DNA helicase RecQ from Pseudomonas fluorescens SBW25

Subject, 725 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  487 bits (1253), Expect = e-141
 Identities = 251/596 (42%), Positives = 371/596 (62%), Gaps = 6/596 (1%)

Query: 9   LKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLIA 68
           LK IFG++ FRG Q AI++ +  G +  V+MPTG GKSLC+Q+PA+ + G A+V+SPLIA
Sbjct: 9   LKKIFGFNQFRGNQEAIVDNILQGNNTFVIMPTGAGKSLCYQLPAVTKEGTAIVISPLIA 68

Query: 69  LMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLAFLQ 128
           LM +QV  L   G+ A  LNSTLS  +   +   +  G  K+LY+APE L +   + FL+
Sbjct: 69  LMKNQVDQLNAFGINAHFLNSTLSKTETNKVKKEVLSGATKLLYVAPESLTKEENVEFLK 128

Query: 129 SLEIALFAIDEAHCVSQWGHDFRREYLQLGQ-LAELFPDVPRIALTATADKRTREEIVER 187
           S +++  AIDEAHC+S+WGHDFR EY ++   +A++   +P IALTATA  + +++I   
Sbjct: 129 SAQLSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDALPIIALTATATPKVQQDIQRN 188

Query: 188 LHLQNAERFLSSFDRPNIFYRIVP--KEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVA 245
           L+++ A+ F SSF+R N+FY + P  K   +K L+ ++  ++  +GI+YCLSRKKV+E+A
Sbjct: 189 LNMEEADLFKSSFNRTNLFYEVRPKAKSDTKKHLIKYVKSQKGKSGIIYCLSRKKVEEIA 248

Query: 246 AFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDL 305
             L   G  A PYHAGL +  R  +Q  FLNEE  ++VATIAFGMGIDK +VR+V H D+
Sbjct: 249 ELLKVNGINAAPYHAGLESAMRIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHYDV 308

Query: 306 PKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAML 365
           PKSLE YYQETGRAGRDGL     M Y  +D+V L++  ++   +ER     +  L  M 
Sbjct: 309 PKSLEGYYQETGRAGRDGLEGHCLMFYKYEDIVKLEKFNKDKPVNEREN--AKVLLQEMA 366

Query: 366 SLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYGV 425
           +  E + CRR+ LL YF E + + CG CDNC      +DA E     + A+  T QR+ +
Sbjct: 367 AYAESSVCRRRVLLHYFGESLNEDCGFCDNCKKKRDAFDAKEDILTAIEAVKETHQRFSL 426

Query: 426 GHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGYGGL 485
            H+V+V+ G+ NE + S+ H+ LSV+G GK   E  WRS+ RQ +  GL++ DIE YG +
Sbjct: 427 DHIVNVIRGEQNEYMESYNHDGLSVFGKGKEENERYWRSVIRQTMIHGLLEKDIENYGVI 486

Query: 486 RLNDSCRPLLKGEVSLELRRDLK-PQTTAKSSTSQASQLVRGEEREQWEALRTLRRKLAQ 544
           +L+ +    LK    +   +D    +        + +   +  + + +E L+  R+K+A+
Sbjct: 487 KLSKTSEDFLKNPHEITFTKDHDFDEMIENDEAEEIANTNKAYDEKLFELLKVERKKVAK 546

Query: 545 EHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVLGGQAE 600
              +PPYVIF D +L EM    PTS  E+A+V+GVG  K+ ++G  FL+++    E
Sbjct: 547 SKGLPPYVIFQDPSLEEMATVYPTSREELAQVNGVGMGKVTKFGAPFLKLITNYVE 602