Pairwise Alignments

Query, 708 a.a., DNA helicase RecQ from Pseudomonas fluorescens SBW25

Subject, 611 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

 Score =  554 bits (1427), Expect = e-162
 Identities = 282/600 (47%), Positives = 402/600 (67%), Gaps = 4/600 (0%)

Query: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVS 64
           A++VL++ FGY  FR  Q  II+ V SG D LV+MPTGGGKSLC+Q+PALL NGL VVVS
Sbjct: 15  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74

Query: 65  PLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRML 124
           PLI+LM DQV  L+  GVAAA LNST + EQQ ++    + G++++LY+APERL+    L
Sbjct: 75  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 134

Query: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEI 184
             L      L A+DEAHC+SQWGHDFR EY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 135 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 194

Query: 185 VERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEV 244
           V  L L +    +SSFDRPNI Y ++ K +P  QL+ ++ E+R  +GI+YC SR KV++ 
Sbjct: 195 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 254

Query: 245 AAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMD 304
           AA L  +G  A  YHAGL N  R   Q++F  ++  I+VAT+AFGMGI+K NVRFV H D
Sbjct: 255 AARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 314

Query: 305 LPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+  L++ L+     +  + +E+HKL+AM
Sbjct: 315 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL-QDIERHKLNAM 373

Query: 365 LSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYG 424
            +  E   CRR  LL YF E   +PCG+CD C+D  + +D +  A+  LS I R  QR+G
Sbjct: 374 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFG 433

Query: 425 VGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGYGG 484
           +G++V+V+ G +N+++R +GH+KL VYG+G+ ++   W S+ RQ++  GLV  +I  +  
Sbjct: 434 MGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSA 493

Query: 485 LRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGEEREQWEALRTLRRKLAQ 544
           L+L ++ RP+L+GE SL+L     P+  A    +         +R+ +  LR LR+ +A 
Sbjct: 494 LQLTEAARPVLRGESSLQL---AVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIAD 550

Query: 545 EHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVLGGQAEAPKE 604
           E +VPPYV+F D+TL+EM  + P + +EM  V+GVG RKLER+G+ F+ ++    +   E
Sbjct: 551 ESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDE 610